Bipolaris oryzae: COCMIDRAFT_6054
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Entry
COCMIDRAFT_6054 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K15217
RNA polymerase I-specific transcription initiation factor RRN5
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_6054
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
COCMIDRAFT_6054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_clus
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
19124813
NCBI-ProteinID:
XP_007688815
JGI:
Cocmi1_6054
UniProt:
W6Z4F1
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MQAESDWTDEPSRSSKRRRTDAERLARPRKYHLEGKYCDRYRLLFNGVVHEAATRFDSSH
MPYAYYSWQIGSSLWSTAEQATFYSALQRLGRDNVPGIADAVGKSIPEVRELLLLLHGAA
VKQGDAGLTFRDIPAAVEIGNECDAQVELVADALAWYQEKWEARQEQKQHGDYWLITSAV
ADAIENAIDGEVDEPAPPRRGGRVIVGACLSCKKFKQKCDRELPCSNCRRRKMAQCVYPQ
SSTKADQPVNSEGPKQDGKPGKLDHAPTTAAILESLPEGSLLHPQNMLKLSRDVFMNRSP
TIPSPWSHWSQYTSDIAQEPSIYRTAFGDFHNLVVSVTTRLVRLAMIQSMSRLRSRSKRT
THGALPTVRKRDVRTAIDLAGMPRNSQERWRGVARRCALRVYDQQLSRNGRKKIKKEVPW
DEFERIMRPEEPIASTLTTDVESSDDQAEARLRASRKATPLPIDRLALSDWDESSMDETT
QPSQSTQQSRDTTGRYMTGDGQTPKPPTLSLKQHDRKIAQIDELEMWIMLGHDPDKSKYL
NQIDPVSDEDDDEDERVITQPDDWRSFTKYRAEWEELESLPKPEDFEANQMPLVIPPVLH
DDTVEREDSSSDYTDAPGKKKQRPRKPELVELEAESAHAYADRKARELAQEMELPMSESS
RQGYGRSSGSSDSSGEGRYRVRQSIETGGRRAVHSDDEVSEMDWETFID
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgagtccgattggactgatgaaccttcgcggtcgtccaaacgtcgccgaaca
gatgcagagagattggcacgtccccgaaaatatcacctcgaaggaaaatactgtgaccga
taccgccttctcttcaatggagttgttcacgaagccgccactcgcttcgacagtagccac
atgccctatgcttattactcctggcaaattggttcttcattgtggtccacagccgagcaa
gctaccttttactcggctctacagcgactgggaagagacaatgtcccaggcatagcagat
gcagtcggcaaaagcataccagaggtgcgcgaactgctcttgctgctccatggcgccgca
gtcaagcagggcgatgctggtctgacttttcgcgacatcccggctgccgttgagattggc
aacgagtgcgacgcccaagtagaacttgtagcagatgcactggcgtggtaccaggagaag
tgggaggctcgacaagagcaaaaacagcatggcgactactggctgatcacttccgccgtc
gctgatgcgattgagaacgctatcgatggcgaggtagacgagccagcacctcctcgtaga
ggggggagggtcattgtaggagcatgtctttcgtgcaagaagtttaagcaaaagtgcgac
cgagagcttccatgcagtaactgcaggcgacggaaaatggcccaatgcgtgtatcctcag
tcatctactaaggccgatcaacccgtcaattctgaggggcccaaacaagacggaaaacca
ggtaaactagatcatgcaccaactacagccgcaattctagagtcactgccagaaggatca
ctgttacacccacaaaacatgctgaagctgtcaagagatgtcttcatgaatcgctcgcca
acgataccttctccttggtcgcactggtcgcaatatacatcagacattgcccaagagccg
tccatctatcgtactgcatttggtgactttcacaacctcgtcgtatcagtaaccacacga
cttgtacgactggctatgatacaatcaatgtctcgtttacggtcacggagtaagagaact
acacatggtgcacttcctacagtaaggaaaagggacgtgcgtaccgccatcgaccttgcg
ggtatgcctagaaacagccaagaaagatggagaggtgttgcgcggcggtgtgcactaaga
gtctacgatcagcagctatctcggaacggtcgcaaaaaaatcaagaaagaagtgccttgg
gatgagtttgaacgcatcatgcgaccagaggagcccattgccagcactctgacaacggat
gtggagtcttcagatgatcaggctgaagcccggttacgagcatcacgaaaggcaacgcct
cttcctatagaccggctcgcgctatctgactgggatgagtcgtcaatggacgaaactacg
caaccatcgcagtccacacagcagtcccgagatacaactggccggtacatgacaggagat
ggtcaaacaccgaagccgccaacactgagcttgaagcagcatgaccgaaagatcgcccaa
atagatgagttggagatgtggatcatgctcggtcacgacccagacaagtccaagtacctc
aaccagatcgatccagtcagcgatgaagacgacgatgaagatgagcgagtcatcacacag
cccgacgactggcgatcattcacaaagtaccgcgcagaatgggaagaacttgaatcacta
ccaaaacctgaagactttgaggcaaaccaaatgcctctggtaatcccacctgttctacac
gacgatactgtagaacgcgaagactctagctccgactacacagatgcaccggggaagaag
aagcagcgaccaagaaaaccggaactagtcgaactcgaggcggagagcgcacacgcttat
gcagataggaaggcacgagaattagcgcaggagatggagctgcccatgagcgaaagcagt
cgtcaaggttatggtaggagtagtggatccagtgacagtagtggtgaggggaggtaccga
gtaaggcaatccatcgagaccggtggccgtagggcggtacattcagacgacgaggtgagc
gaaatggactgggaaacgtttatcgattga
DBGET
integrated database retrieval system
