Bipolaris oryzae: COCMIDRAFT_6060
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Entry
COCMIDRAFT_6060 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
bor
Bipolaris oryzae
Pathway
bor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COCMIDRAFT_6060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_6060
Enzymes [BR:
bor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
COCMIDRAFT_6060
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
COCMIDRAFT_6060
Prokaryotic type
COCMIDRAFT_6060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Motif
Other DBs
NCBI-GeneID:
19124815
NCBI-ProteinID:
XP_007688816
JGI:
Cocmi1_6060
UniProt:
W6Z3V2
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MAPRKKAVTATASSSKAAKSAKAIITSPLTPPTVALPPSRIHNTSYHYPLLLGNRSVCDA
LLSWFNGVAETRSMPWRKAWIDPADFEGREEELKSILSKRAYEVWVSEVMLQQTRVSTVI
PYFNNWVAKWPTVEDLAAANHDDVLSVWKGLGYYSRATRLHEGAKQMTSARSASGVIPSG
AVELQEVPGIGRYTAGAVSSIAFGEAEPVLDGNVARVLSRQLGLYMDAKDKKTTDVMWDM
ADQLIKFASNYPEQQKSAVPGLWNQALMELGSTVCTPRPRCDECPIQATCRTYSEGKALS
QKRQASTAIPDIEDACMLCAPLDTEDLVTIAEGEAADDTARATKKRKAATKQSNTLSNYF
TISTPKSNADTETDQESADDTPVEESKKRKLPPPASDIKPILSYCSLFPMKVAKKKAAEE
DCIVCMIELCFPDCESKWLIEQRPSKGLLASLWQFPQATPPASQKTPQQRKAFAQKHVAD
LAAGKVDMSLARYVASLPPLVHVFSHLKLTMHAYQFRIDADNDQGFAAICKGPPARKWVD
GAAMDDETLSTGMRRCWDLLSSEK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggctccgcgcaagaaagccgtaacagcaacagccagttctagcaaagctgcaaagtct
gccaaggcaatcatcacatcccctttaacaccacccaccgttgcactaccgccatcgcgt
atccacaacacatcgtaccactacccgctcctcttgggcaatcggtcggtatgcgacgcg
ctactgtcctggttcaatggcgtcgcagagacgcgtagtatgccgtggagaaaagcgtgg
atcgaccccgcggactttgaaggccgggaagaagagcttaaaagtattctgtcaaaaaga
gcctacgaggtttgggtgtctgaagtcatgttacaacagacacgtgtgtcgactgtcatt
ccatacttcaacaactgggtagcaaaatggcccacagtggaagatctggctgctgcgaac
catgacgatgtgctctccgtttggaaaggcttgggatactactcccgcgcaactcggctt
catgagggcgctaagcagatgacgtctgcacgtagtgcttcgggcgtaattcctagcggg
gccgttgaacttcaagaagtaccaggcatcggaagatacactgcaggtgcagtatctagt
atcgcatttggcgaagccgagccagtactcgatggaaacgttgcgagagtgctaagccgg
cagctgggcctgtacatggacgccaaagacaaaaagacgacagatgtgatgtgggatatg
gcggaccaattgatcaaattcgcatccaactacccggaacagcagaaaagcgcggtaccg
ggtttatggaaccaggcgctgatggaactcggatctaccgtctgtactccacgaccacgg
tgtgacgaatgtcccatacaagccacgtgcagaacatacagcgaaggaaaagcgttatct
cagaagcgccaagcatctactgccatcccggacattgaagatgcatgcatgctgtgtgcg
ccactagataccgaagatctggttactattgccgagggcgaagcagcagacgacacagca
agagctaccaagaagagaaaggctgctacgaagcagtccaacaccctctcgaattatttc
actatcagcacgccaaagtctaatgctgacacggaaactgatcaagagagcgccgatgac
accccagtggaagagtctaagaagcggaaattgcccccaccagcttcagacataaagccc
atattgagctattgttctttgtttcctatgaaggtcgcaaagaagaaggctgcggaagaa
gactgcatcgtgtgcatgattgagctttgctttccagattgtgaaagcaagtggctgatc
gaacaaagacccagcaaagggcttttggcatccttgtggcagttcccacaggctacacca
ccggcatcacaaaagacgccgcagcaacgcaaggctttcgcccagaaacacgttgctgac
ctcgctgcaggcaaggttgatatgagtctagcgcgttatgtggcgtctttgccgccattg
gtccatgttttttctcatttaaagctcactatgcacgcctatcagttcaggatcgacgct
gataacgaccaaggtttcgcagccatatgcaagggcccgccggcccgcaagtgggtggac
ggtgcggctatggacgacgagacgttgtcgactggaatgcgcagatgctgggaccttctg
tccagcgagaaataa
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