Bipolaris oryzae: COCMIDRAFT_613
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Entry
COCMIDRAFT_613 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
bor
Bipolaris oryzae
Pathway
bor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCMIDRAFT_613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_613
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
COCMIDRAFT_613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
19124851
NCBI-ProteinID:
XP_007682643
JGI:
Cocmi1_613
UniProt:
W6ZG23
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MAMNIDRRRNNAPSGGTSAPVFARTIREPQYVEKLRPTRSRGPNELRRIFLQTSIIPSAS
GSAYLEIPSSSAANTPSLIAPTSSLKITASIQGPKPLPRSAPFSPSLLLTTTVKFAPFAT
RHRRGYLRDATERDLGVHLETALRGVIIGERWPKSGVEVVVTILEGDEDGWWGDLASGGS
ATGSGWGLLNVLAGCITVASAAITDAGIDCVDVVCGGVAAIVRNPSSKNEQELARILDPC
PAEHKEVVAACVVGYLASRDEITEMWMKGDVGGEPDALIEGATHAAVGSLAVVKEVLLEA
VQAKFQKQTEGGESGVKRKAQDVDMSG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggctatgaatattgacagaaggagaaacaatgcgcctagcggtggaacaagtgctcct
gtgtttgcgcgcactatcagggagccgcaatatgtcgaaaagttgagaccgacgagatca
agaggtccaaatgagcttcgcaggatcttcctccaaacgtccatcataccctctgcgtcc
ggctccgcttacctcgagataccgtcgtcttcggctgcaaacactcctagcctcatcgca
ccgacttcatcgcttaagataacggcctcaatacagggcccaaagcccctcccccgcagc
gcgccctttagtccgtcgcttctcctcacgactacggtcaaatttgcaccgtttgcaaca
cggcataggcggggttatctacgcgacgcaacagaacgtgacctgggcgtacatctggag
acagcactacgaggcgtcattattggcgaaagatggcccaagagtggcgtggaagttgtg
gtcacgattcttgagggcgatgaagatggctggtggggtgatttggcaagcgggggaagt
gcgacaggaagtggatggggtcttttgaatgttttggcaggctgcatcacggttgccagt
gctgcgataacagacgcggggattgattgcgtggatgtagtatgtggaggtgtggccgcc
attgtgcgaaatccgtcgtcaaagaacgagcaagagctggccaggatcctggacccatgt
cctgcggagcacaaggaagtggttgcagcatgcgtagtgggctatttggcttcgagagac
gagatcacggagatgtggatgaagggagatgtcggtggagaacccgatgcgctcattgag
ggagctacacacgcggctgtgggcagcctcgcggtagtcaaggaggtattgctcgaggca
gttcaggccaagttccaaaagcaaaccgagggcggcgagagcggcgtgaagagaaaggcg
caggacgtggacatgagtggatga
DBGET
integrated database retrieval system
