Bipolaris oryzae: COCMIDRAFT_648
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Entry
COCMIDRAFT_648 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
bor
Bipolaris oryzae
Pathway
bor03430
Mismatch repair
bor03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
COCMIDRAFT_648
03460 Fanconi anemia pathway
COCMIDRAFT_648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_648
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
COCMIDRAFT_648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
19124969
NCBI-ProteinID:
XP_007682647
JGI:
Cocmi1_648
UniProt:
W6ZL58
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MADEMDTLQSSPRGTKRKGDDSLSLPAPRRIKALSQDVVNKIAAGEIIVAPVHALKELIE
NAVDAGSTALEILVKDGGLKLLQITDNGHGIDKEDLPILCERFTTSKLKAFEDLTSIGTY
GFRGEALASISHIAHLKVTTRTKESSCAWEAHFADGKLTSPKPGQSAEPKPKAGRQGTTI
TVEDLFYNVPSRRRAFRSASEEYAKILELVGRYAVHCQGVAFSCKKANETSGSSVTVPAS
ATVKDRIRQIHGISAANDLVALNVEDDRWGFKCDGWISNANYSAKKTQMLLFINHRSVES
QVIRKSVEQTYAMFLPKGGHPFFYLSLEIEPQRVDVNVHPTKREVHFLNEDEIIAMICDS
IRDNLSKVDTSRSFATQSLLANPKVPLSTPLKPTLPMTPSKGDASDRSASRAPQTSTRKR
NENNLVRTDTSIRKITSMLQPERSVDDALDEESEMEYELTERTPVACRLTSIKELRAEVR
DAMHTELTDIISTHTFVGIVDEQKRIAAIQGGVKLFLIDYGMLCNELFYQIGLTDFANYG
YIRFDPPLSLDELLKIAAQQEKSKAGDSGSEVDWDQVVEVVREQLINKAALLSEYFAIDI
TPQGELCSIPLLLKDYTPCMGKLPQFLLRLGPHVNWEEEKACFQTLLRELASFYVPESLP
FASEAETDGKEDGDKNGKGKGKAQEDEDEETATRRKNVLQAIEYTIFPACKGRLVGTKGM
LKGGVIEVANLKGLYRVFERC
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaaatggatactttacaatcatcgccacgtggaactaaacgcaaaggcgac
gatagcctttcacttcctgcgccacgcaggatcaaggcactttcgcaggacgtcgtcaac
aagattgctgcaggagaaatcatcgtcgcgcctgtgcatgctttgaaagagctgattgaa
aatgctgtggatgcgggatcgactgcactagaaatcttggtgaaagatggcggtctcaag
ctactgcagattaccgacaacggacatggcattgacaaagaagatttaccaatcttgtgc
gagcgttttactacttccaagctcaaggcctttgaggacctaacctcaatcggcacgtat
ggcttccgtggcgaggcgctggcgagtatcagccacattgcccacctcaaagtcactacg
aggaccaaagagtcaagttgtgcttgggaggctcattttgcagacggcaaactcaccagt
ccaaaaccgggccagagcgcagaaccaaaacccaaggcaggacggcagggtaccaccatt
acggttgaggatttgttctacaatgttccctctcggcgtcgcgcttttcgttcagccagt
gaagagtatgccaagatacttgaacttgtcggacgttatgctgtgcattgccaaggagtt
gcattttcttgcaaaaaggccaatgaaacttcgggaagcagcgtgacagtacctgcatct
gctacagtaaaagaccgcatacggcaaattcatggtatcagtgccgccaacgacttggtg
gctttgaacgttgaagatgatcgctgggggttcaagtgcgatggctggatcagcaatgca
aactacagcgcgaagaagacgcagatgttgctcttcatcaaccaccgttcagttgaatct
caagtgatcaggaaaagcgtcgagcagacatatgcaatgtttctacccaaaggagggcat
ccattcttctatctcagtctcgagattgagccgcaacgagttgatgtcaacgtacatcct
acaaagcgggaggtgcatttcctgaatgaagacgagattatcgctatgatctgcgattca
atccgtgacaatctcagcaaggtcgacaccagccgatcctttgcaacacagtcactgctg
gcaaatcctaaagttccgctctcaacgcccctgaaaccgactctacccatgactcctagt
aagggcgatgcatcagaccgaagtgcctcgagagcaccacagacatcgaccaggaaacga
aacgaaaacaacctagttcgaacagatacttcgatccgcaaaatcacatctatgctgcag
cccgaacgatcagtggacgatgctttagacgaagagagtgagatggagtacgaactcaca
gaaagaacaccagtagcatgtcgtctaacctccatcaaagaactgcgcgcagaagtacgc
gacgcaatgcacacggagctcactgatatcatctcaacacacacatttgtcggcattgtc
gacgagcaaaaacgcattgcagctatccaaggaggagtcaagcttttcttgatcgattac
ggcatgttgtgcaacgaactcttctatcagattggtctaacggactttgctaattacgga
tacatacggtttgatccgcctttgtcgctagacgagctgctcaagatagcagcgcagcag
gaaaagagcaaggcgggcgactcagggagcgaagtagattgggatcaagttgtcgaggtg
gtcagggagcagcttatcaacaaggcggcgctgttgagcgagtactttgccattgatatt
actccacagggagagctctgttcaatcccgcttttgctaaaggattacacgccgtgcatg
ggcaaactcccgcaatttctgcttcgtctgggccctcatgtcaattgggaggaggaaaag
gcgtgctttcagacgctactaagggagttggcgtcgttttatgtgccagagagcttgccg
tttgcatctgaggccgagactgacggtaaagaggatggtgacaagaacggaaagggtaaa
ggcaaggcgcaggaggatgaagacgaggaaactgctacgagacgcaagaacgtactccaa
gcgatcgagtataccatctttccggcatgcaagggacggctggtggggacgaaagggatg
ctcaagggcggggtcattgaagtcgcaaacttgaagggcctgtatcgtgtgtttgagcga
tgctga
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integrated database retrieval system