Bipolaris oryzae: COCMIDRAFT_6749
Help
Entry
COCMIDRAFT_6749 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
bor
Bipolaris oryzae
Pathway
bor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
COCMIDRAFT_6749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_6749
Enzymes [BR:
bor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
COCMIDRAFT_6749
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
COCMIDRAFT_6749
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Mpt_N
Motif
Other DBs
NCBI-GeneID:
19125069
NCBI-ProteinID:
XP_007689594
JGI:
Cocmi1_6749
UniProt:
W6ZJX3
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MVGKKEVATPKPKAAPRGATKAKVAPGAPEVQKVDGGDSMEIDSEGANPRANAGGSATDL
NPGASTSADQTRKRRAPLTHAKDEFAALLEPFYYGKSLTDPINTARDKWNLLPAFLKTKG
LVKQHVDSYNHFVDVDLKKIIKANRFVRSDFDPKFLLEYTDIRVLSPNRQEEDDLEHHRS
TITPNECRLRDMTYAAPIVVDIIYTRGNAKVKRTGIKIGRMPIMLKSNKCVLAGKNDREM
AVMEECPLDPGGYFITRGQEKVILVQEQLNKNRVIVESAKGIMQASVTSSTHERRTKTYV
IQKKGLMYLRHNTLSEEIPIVFVMKALGVHSDKEILLMIAGEDSAYQDNFAINFEACARE
QIHTQERALEYIGHRVRLVKKPLGTSRNRNYHLEAIECLSNVVLPHVPVEGTNYRPKALY
VALMARRVLMAMQDPKLVDDRDYVGNKRLELSGQMLSLLFEDHFKRFNHDFKLSIDKVLK
KQVRAQEFDAFSHFSVHKNHITMGVERAIATGNWSLKRFKMERAGVTHVLSRLSYIAALG
MMTRISSQFEKTRKVSGPRALQPSQFGMLCTSDTPEGEACGLVKNLALMTHITTEDDDDP
VRKIVFMLGAEDICSQTGEEIHAEGVYSVCLNGTPIAVTDTPKRFLNSFRKLRRMGRISE
FTSIHIDHDHCEVHIATDEGRICRPMIIVENQHSKVTSRYLKALRKGTMEFEDFLTRGLV
EYLDTNEENDTNIALKESEINQHTTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMG
KQAIGAIAYNQFNRIDTLLYLMVYPQQPMVKTRTIELTKYDKLPAGQNATVAVMSYSGYD
IEDALILNKASCDRGFGRCQVFKKHVTPLKTYANNTSDRINAGALDVANPNHQAIGQDGI
AQVGARLEAGDAFLLKSIPQDTAGPASNLYKDKPERYKLPDCSYIDKACITENESGTTLI
KLLMRQTRRPELGDKFSSRHGQKGTTGLIVQQEDMPFNDQGICPDIIMNPHGFPSRMTVG
KMMELLSGKAGVLNGTLEYGTAFGGSTVEDMSQILVEKGFSYTGKDYLTSGITGEAHQFY
TFFGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRARDGGLRLGEMERDCLIAYGAS
QLLLERLMISSDAHNVDVCEKCGQMGYSGYCKLCESEKAIRKITMPYAAKLLIQELGSMN
VKVTIGLEDEFPRDA
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcaaaaaggaagttgcgacccccaagcccaaagctgccccgcgcggggcgaca
aaggcgaaggttgcgcctggcgcacccgaagtccaaaaggttgatggcggcgattccatg
gagattgattctgagggcgccaaccctcgagcgaatgctggaggtagtgcgacagatctc
aatcctggggcttctacgtcagcagatcagacgcgaaagcgacgagcgccactcacccac
gcgaaagacgagtttgccgctcttctcgagcctttctactacggcaagagtctgaccgac
ccgatcaacaccgcacgcgacaaatggaatctactcccagcctttttgaagaccaagggt
cttgtgaaacagcacgttgactcttacaaccactttgtcgatgtcgacttgaagaagatt
atcaaggccaaccgtttcgtccgtagcgacttcgaccccaaatttctcctcgaatacacg
gacatccgcgtactgtctccgaatcggcaggaagaagatgacctcgagcatcatcgtagc
accattacacccaacgaatgccggttacgtgacatgacatatgctgcaccgatagtagtg
gatattatatacactaggggaaacgctaaggtcaagcggacgggaatcaagattggcagg
atgcccattatgttgaaaagtaacaaatgtgtacttgctggcaagaacgatcgcgaaatg
gctgtcatggaggagtgtccgctagatccaggaggctacttcatcacgcgtggacaagag
aaggttatccttgtccaagagcaactgaacaagaatcgagtcattgtcgaaagtgcaaag
ggaatcatgcaagccagcgttacgagctctacccacgagaggcggacgaagacatatgtc
atccaaaagaaagggctcatgtaccttcgacacaacactctttctgaagagattccaatc
gtgttcgtcatgaaagccctaggagttcattccgataaagaaattcttctcatgattgcc
ggagaagatagtgcataccaggacaattttgccatcaacttcgaggcgtgcgcaagggag
cagattcatacacaagaaagagctctggaatatattggccaccgcgtacggctagtcaaa
aagccccttggtacctcgcgcaacaggaactaccaccttgaggcaattgaatgtctatca
aatgttgtccttccccacgtcccggtcgagggcacaaattaccggcccaaggcactatac
gtagctctcatggctcggcgagttctgatggcgatgcaagacccgaaactggtagacgac
cgcgactatgttggcaacaaacgtctcgaactgtctggccagatgttgtcccttttgttt
gaagatcacttcaaacgcttcaaccacgatttcaagctgagcatcgacaaagttcttaag
aagcaagttagggcgcaggagtttgatgccttttctcacttcagcgtgcataagaaccac
atcaccatgggcgtcgagcgcgcgattgctaccggaaattggagtttgaagcgtttcaag
atggagcgggccggagtcacgcacgtcttgagcagactcagctacattgctgcattgggt
atgatgacgagaatcagttcgcagtttgagaaaactcgcaaggtctctggccctcgagcg
cttcagccgtcgcaatttggtatgctttgtacttctgataccccagaaggagaggcttgt
ggtctagtcaagaacctggcactcatgacgcatatcacaaccgaagacgatgatgatcca
gtccgcaagattgtatttatgctgggtgctgaggatatttgttcacaaacaggagaagag
attcacgctgagggtgtttatagtgtctgtctcaatggtacgcctattgctgttacagac
actccaaagcgattcctcaacagcttccggaaactccgacgaatgggacgcatttctgag
ttcaccagcattcacatcgaccatgatcactgcgaagtccacatcgcgactgacgaaggg
cgtatctgtaggccaatgataattgttgagaatcaacattcaaaggttacttcgcggtac
ttgaaagcgcttcgcaagggtaccatggagtttgaggatttcctgacaagaggtctcgta
gagtacctcgacaccaacgaagagaacgataccaacatcgccctcaaagaaagtgagatc
aaccaacacactacgcatcttgagattgagccctttaccattttgggcgctgtcgctggt
ctcattccttatcctcaccacaaccaatcgcctcgtaacacttaccaatgtgctatgggt
aagcaagcgattggcgctatagcatacaaccagttcaacaggatagacacgctgctatac
ctgatggtctacccgcaacagcctatggtcaagacgcgaaccattgaactcacaaagtat
gacaagcttccagcaggtcagaatgcaaccgtcgccgtcatgtcatactcgggttacgat
atcgaagatgctctcattctcaacaaggcgtcgtgcgatcgaggatttggtcgttgtcaa
gtgttcaagaaacacgtcacgcctctcaaaacgtacgccaataacacttccgatcgcatc
aacgctggcgcccttgacgtagcgaatcccaaccaccaggcgattggtcaagatggtatt
gctcaagttggtgctcgcctcgaggccggcgacgccttcctgttgaaatcgatacctcaa
gatactgcgggtccagcgtcgaatttgtacaaagacaagcccgaaagatacaagttgccc
gactgcagctacatcgacaaagcctgtatcacagaaaacgaatcaggcacaacgctgatc
aaactactaatgcgccaaacccgtcgcccagaactcggcgacaaattctcatctcgccat
ggccaaaaaggtacaacgggcctcatcgtccagcaagaggacatgcccttcaacgaccaa
ggcatctgcccagacatcatcatgaacccgcacggtttcccctcgcgtatgacagtcggc
aaaatgatggagctcctctccggcaaagccggcgtcctcaacggcaccctcgaatacggc
accgccttcggcggctccaccgtcgaagacatgtcgcagatcctcgttgaaaagggcttc
tcctacaccggaaaagactaccttacctccggtatcacgggcgaagcccaccagttctac
accttctttggccccatttactatcagaagctgaagcatatggtccaggataaaatgcac
tcgcgtgcccgtgggccccgtgctatcttgacccgccagccgacggaaggtcgtgcacga
gacggtgggttgcgtctcggagaaatggaacgtgattgcttgattgcgtatggtgcgtcg
cagttgctgttggagcgtctaatgattagttccgatgcgcataatgtggatgtttgtgag
aagtgcggccaaatgggatacagcgggtactgcaaactgtgcgagagcgaaaaggcgatt
cgcaagattaccatgccgtatgcggctaagcttttgattcaggagctgggcagtatgaat
gtcaaggtgacgattgggctggaggatgagtttccgagggatgcatga
DBGET
integrated database retrieval system