Bipolaris oryzae: COCMIDRAFT_7108
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Entry
COCMIDRAFT_7108 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_7108
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
COCMIDRAFT_7108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_GCN1
HEAT_EF3_N
TOR1L1_N
Vac14_Fab1_bd
ARM_TBCD_2nd
HEAT_2
ResIII
CLASP_N
Motif
Other DBs
NCBI-GeneID:
19125175
NCBI-ProteinID:
XP_007690002
JGI:
Cocmi1_7108
UniProt:
W6Z7D0
LinkDB
All DBs
Position
Unknown
AA seq
1937 aa
AA seq
DB search
MSATRLDRLVTLLETGSTALIRNTAADQLADVQKQHPDELFNLLTRVIPYLRSKSWETRV
AAAKAIGGIAANADKFDPNADDDDADESSKPGVKSESNHNVKSEDSNGAVKKEENGDAAL
PPLSHGLDLATLDLPSILKFGKVLASSGAKEHDYKLAAMDPAERLEYQKSTLLKRLGFEG
PWTEDLSPPHEIMPQTPGPKTPAPNRIDTNVPRADSSNLASSPPPALATPNGQGLSKRQQ
NALKRKQKKNAAGGANKVQIVDFNANSRKDSQSETVETPSRPHPIALKLEKNENGDEGDS
GVNDYFSLERNGGDDDAKFVKEFKGAPVPEKSSFQAEAEEAGLEWPFERVCSYLAVELFD
FTWEVRHGAAMGLREILRVHGAGAGRRKGLSRAENDQLNQQWLNDLACRMICIFMLDRFA
DFTGDNVIAPIRETAGQALGSLLQYMTGDNVLATFRVLNRLIMNQDLPVDTNPLSAPWAL
CQGGMIGLRYLVAVRNDLLLQDGTLMDGVLAAVINGLSNDDDDVRAISAATLIPVVKEFI
EMRPKALEGLMNVVWSCLSSLQDDLSASTGFIMDLLAKLCGFPQVLEAMQANARQDPSQS
FHELVPRLFPFLRHTITSVRAAVLRALITFLNIQSQDSDGWIDSKALQLIFQNILLERNE
GVLKLSMQLWNAVVASLGSQLPNHLEPVLDAIVPLTLTPIGVSRHPISLDKSLLIKPSGQ
AMGPPPNTETSRKSTPPDGAEPAQKRRKKSRPGKDDMAIPAPSTQSHNVDGHMITGDLEL
IGADVMIRSRTSAAQALGTAMGAWPEESRLQAFKSRLVSPLSSPNSTTQLTAAIIIEEFG
KNLKTKDALAELFVQHLLPMVEGERPLAYEDLVPKLQIVRTQCSSLLHIFQEAHVQNLPN
LSTIVQGLPFTNNYAFGVADAEKLVTVQYEKLKKAMTPSSRMIAAANLETTRKEVEASIQ
EAKNIKEERDIRIKAAAAGALVALDSPPKKPSPPIKAMMDSIKKEENVELQKRSAAAVAG
YIVHLVNGKRSGVVNKVVGNLVKFYCMETAETPEFAGQSHIETGILTLKKDEDVRDHPDA
ARFAEESRAARITKRGAREGLEQVVERFGAEVFEKVPILKDLIERPIKEAFSEPSLPPQI
FNEDGVFGQEVVDGLSTLRALVGKLHPSVRSFIKELLPLIARALQSKLYVLRYAAAKCFA
TICSVMSVEGITMLVESVLPTISDGGNVHARQGAIECIYHLIHVMDDAILPYVIFLITPV
LGRMSDSDNDVRLLATTSFATLVKLVPLESGIPDPPGLPDSLLKGRDRERKFVAQMLDAK
KVEPFEIPVGIKATLRSYQQDGVNWLAFLNRYNLHGILCDDMGLGKTLQTLCMVASDHHM
RADEFAKSGDPNFRRLPSLIVCPPTLSGHWQQEIRQYAPFLSCVAYVGSPPIRSQYRNEL
DKVDIVITSYDICRNDADILKPINWNYCVLDEGHLIKNSKSKTSQAVKQFQSNHRLILSG
TPIQNNVLELWSLFDFLMPGFLGTEKVFQERFAKPIAASRFAKSSSKEQERGALAIEALH
KQVLPFLLRRLKEEVLDDLPPKILQNYYCDLSELQRNLFDDFTKRQGKEIQSKAGNADRE
SKQHIFQALQYMKKLCNSPSLVVKGPTNKAYESTQQYLKKHNTTIDDIAHAPKLGALKDL
LVDCGIGASDVVSDKSANANGDLPEAVSQHRALVFCQMKEMLDMVQHNVLEKLLPSVQFM
RLDGGVEATKRQEIVNKFNTDPSYDVLLLTTSVGGLGLNLTGADTVIFVEHDWNPQKDIQ
AMDRAHRIGQKKVVNVYRIVTRGTLEEKILNLQRFKIDVASTVVNQQNAGLQSMQTDQIL
DLFNVSADSNDPSALPAPPSNAKDDGTGIDENDAVDATGALREKGKKGFLDELGDLWDEK
QYDEEFDLDGFLGKMKA
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaccagattggaccgtctcgtcacgctcctcgagacgggcagcacagcattg
atccggaacacagcagccgaccaacttgctgacgtccagaaacaacatcccgatgaacta
ttcaacctcctcacccgcgtcatcccttacctgcgctcaaagagctgggagactcgagtc
gctgccgccaaggccattggcggcattgccgctaacgccgacaagtttgatcccaatgct
gacgatgacgatgccgatgaatccagcaaacccggcgtcaagtccgagtcaaatcacaat
gtcaagtccgaagacagcaatggcgccgtcaagaaggaagaaaacggcgacgctgccttg
ccgcctctctcccacggactcgatctagcgaccctcgacctcccctccatcctcaagttt
ggtaaagtcctggcttcctctggtgcaaaggagcatgactacaagctggctgccatggac
cccgccgagcgtttggagtaccagaagagcaccctcctcaagcgccttggctttgagggt
ccatggaccgaggacctatcaccaccccacgaaatcatgcctcaaacaccggggcccaag
acacctgcaccaaatcgcatcgatacgaatgttccacgtgccgacagctcaaatctagcc
tcttctccacctcctgccttggcaacacccaacggccagggactaagtaaaaggcaacaa
aatgccctcaaacgcaagcaaaaaaagaacgctgcgggaggtgctaacaaggtccaaatc
gttgattttaacgcaaactcacgcaaagattcacaatcagaaacagtagaaacccccagt
cgcccacatccaattgcccttaagcttgagaagaacgagaacggcgacgaaggcgacagt
ggtgtaaatgactacttttcgctcgagcgcaacggcggcgatgatgacgccaagtttgtc
aaggagttcaagggcgcgcccgtacccgaaaagtcgtcgtttcaggccgaggctgaggag
gctgggctagaatggccattcgaacgtgtgtgttcgtatcttgctgtcgaactttttgac
ttcacctgggaggtccgtcatggggctgccatgggtcttcgagaaatcctccgtgtgcac
ggcgccggcgccggaaggcggaaagggctctctcgagccgagaatgatcagctcaatcaa
caatggctcaacgacctggcgtgccgcatgatctgcatcttcatgctcgatcgctttgca
gatttcactggtgataatgtcattgcaccaatacgtgaaactgcaggacaagcactcggc
tccttgctgcaatacatgactggcgacaatgtgctggcaaccttcagagtcctcaatcgc
ctaatcatgaatcaggacttgcctgttgacaccaaccctctcagtgcaccctgggccctt
tgtcagggtggtatgattggtttgcgataccttgtcgctgtgcgaaacgatctgctcctt
caagatggtactctgatggatggtgtgctcgctgcagtcatcaatggcttgagtaatgac
gatgatgatgttcgagccattagtgccgcaacgctaattcccgtcgtaaaggaattcatc
gagatgcggcccaaggcactcgaaggattgatgaatgtcgtctggtcatgtctctccagc
ttgcaggatgatcttagtgctagtaccggtttcatcatggacttgctggctaagctctgc
ggtttccctcaagtgctcgaggcaatgcaagcaaacgctcgccaagacccaagccagtca
ttccatgagctcgtccctcgcctcttccccttcctacgacataccattaccagtgttcgt
gcggctgtgttgcgtgcgctaatcacattcctcaatattcaaagccaggactccgatggt
tggatagacagcaaggcgttgcaattgatattccagaacatcttgctcgagcgcaatgaa
ggtgttctgaagctttcaatgcagctttggaatgccgtggttgcaagcttgggtagtcaa
ttacccaaccacctggagcccgtattggacgccattgttcccctcacccttacacccatc
ggagtctctcgccatcccatttccctggacaagtcgcttctcatcaaaccttcaggacaa
gccatgggaccaccaccgaataccgagacgagccggaaatcgacaccgcccgatggcgcc
gaaccagctcaaaagagaagaaagaagtcccgcccaggaaaagacgacatggcaatacca
gcaccatccactcaatctcacaacgtcgacggacacatgattactggagatctggaactc
attggagcagatgtcatgatcagatccagaacctccgcagcccaagctctgggaacagcc
atgggtgcctggcccgaagaatcgcgacttcaggctttcaagtccaggctggtaagcccc
ttgtcctcacccaactccacgactcagttaacggctgccatcattatcgaggagtttgga
aagaacctgaaaaccaaggacgcgttggccgagttgttcgtccaacatctgctacccatg
gtggaaggagagaggcccctagcctacgaggatcttgtgccaaaactccagattgttcgc
acgcagtgttcttcgttgctccacatcttccaggaagcacacgtgcagaacctgccgaac
ctttcaactatcgtccaaggattaccattcacaaacaactatgcttttggagttgctgac
gccgaaaagctggtcactgtgcaatacgagaagctcaagaaggccatgacaccttcctct
cgtatgatcgctgcagcgaacctagagacgacacgcaaggaagtagaagccagcatccag
gaagctaagaatatcaaggaagaacgcgatatccgaatcaaggccgctgctgctggcgca
cttgtggcgcttgactcgcctcccaagaagccatcaccacctatcaaggctatgatggat
agcatcaagaaggaggagaatgtggaactgcaaaaacgttctgcagctgcggttgctggt
tacattgtacatctggtcaatggcaagagatcgggtgtggtaaacaaggttgtcggcaac
ctggtcaaattctactgcatggagacagcagaaactcccgaattcgctgggcaatcacac
attgaaaccggtatcctgacacttaagaaagacgaagacgtgcgcgaccatccagatgct
gctcgattcgcagaggagtcacgggctgctcgaatcaccaagcgtggtgcacgcgagggc
ctggaacaggtcgttgaacgtttcggtgccgaggttttcgaaaaggtgcccattctgaag
gacctgattgagcggccaatcaaggaggcattcagcgaaccgtcgctgcccccgcaaatc
ttcaacgaagatggcgtttttggacaagaagttgtcgatggactgtcgactttacgcgct
ctggtaggcaagctacatccaagcgtgagaagctttatcaaggagctccttccactcatt
gccagggctttacagagcaagctgtacgtattgcgatacgcagctgctaagtgttttgcg
accatttgcagcgtcatgtcggtcgagggtatcacaatgcttgtcgagagtgtgctgcca
actattagtgatggtggcaacgtgcatgctcgccagggagcaattgagtgcatctaccat
ctcattcacgtcatggacgatgcaatcctgccatatgtcatcttccttatcactcctgtc
cttggacgaatgagtgattcagacaacgacgtccgattactcgccacaaccagcttcgcg
acactggtcaaactcgtaccactcgagtcgggtattcccgatccaccaggtcttccagac
tccctgctcaaaggccgagaccgagagcgcaagtttgttgctcaaatgctcgacgccaag
aaggtggagccttttgagattcctgtcggcatcaaggcaacgctccgttcctaccaacaa
gacggtgtcaattggctggcattccttaatcggtataacctccacggcatcctctgtgac
gacatggggcttggtaagactctgcaaactctttgcatggtggctagcgaccatcacatg
cgtgctgacgagtttgccaaatctggggatccaaacttccgtcgcctaccgtctctcatc
gtgtgcccgcccaccctttctggtcactggcagcaggagattcgccaatatgcgccgttc
cttagctgtgttgcttacgtaggctcgccacccatccgaagtcagtacaggaacgagctt
gacaaagtagacattgtcattacttcctacgacatttgccgcaacgacgccgatatcctc
aagcccatcaactggaactactgcgtcctagacgaaggacacttgatcaagaactcaaaa
tcaaagacaagccaagctgtcaagcagttccaatcgaatcaccgcctcatcctctccgga
acgccaattcaaaacaacgttcttgagctgtggtccttgttcgacttcctcatgccaggt
ttccttggtaccgaaaaggttttccaggagcgttttgccaaacccattgctgcatctcgg
tttgcgaagagttcgtcaaaggagcaagaacggggtgctttggctattgaggctcttcac
aagcaagtgctgcccttccttcttcgtcgtctcaaggaagaggttctggatgatctacca
cccaagattctacagaactactattgtgatctttccgagctgcagcgcaacctctttgac
gacttcaccaagcgtcaaggcaaggaaatccagtccaaggctggcaatgccgatcgtgag
agcaagcaacacatcttccaggctttgcagtacatgaagaaactttgcaactcgccttcg
cttgttgtcaagggccccaccaacaaggcgtacgagtcaactcaacagtacctcaaaaag
cacaacactacgattgacgatattgcgcacgcacccaagctcggggctctcaaggatctg
cttgtcgattgtggtatcggagcatcagacgttgtcagcgataagtcagcgaatgcgaac
ggcgacttacccgaagccgtctcccagcatcgcgccctcgtcttctgtcaaatgaaggag
atgctcgatatggtgcagcacaatgtgctcgagaagttgttgccatctgttcagtttatg
cgcctggacggtggtgttgaagccaccaagcgacaagaaatcgtcaacaagttcaacaca
gatccatcttacgacgtcttgcttcttaccactagtgtcggtggtctcggtctcaatctg
actggtgccgacaccgtcatcttcgtcgagcacgactggaacccgcaaaaggatatccaa
gccatggaccgcgcgcatcgtattggtcaaaagaaggtagtcaacgtctaccgcattgtt
acgcgcggtaccctggaggagaagatcctaaacctccaacgcttcaaaatcgacgtcgcc
tcgacggtcgtcaaccagcaaaacgctggtctccagtcgatgcaaacagatcaaatcctc
gatctcttcaacgtatctgccgattccaacgatccctctgctctgcctgcaccaccttcc
aacgctaaagacgacggcaccggcatcgacgaaaacgacgccgttgatgccacgggcgcg
ctgcgagaaaagggtaaaaagggcttcttggatgaactcggtgatctctgggatgagaag
cagtacgatgaagagtttgatcttgacggtttcctgggcaagatgaaagcttag
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integrated database retrieval system
