Bipolaris oryzae: COCMIDRAFT_7155
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Entry
COCMIDRAFT_7155 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
bor
Bipolaris oryzae
Pathway
bor04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
COCMIDRAFT_7155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bor04121
]
COCMIDRAFT_7155
Enzymes [BR:
bor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
COCMIDRAFT_7155
Ubiquitin system [BR:
bor04121
]
Ubiquitin ligases (E3)
HECT type E3
COCMIDRAFT_7155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
HEAT_EZ
TPR_TNPO3_IPO13_4th
Motif
Other DBs
NCBI-GeneID:
19125194
NCBI-ProteinID:
XP_007690064
JGI:
Cocmi1_7155
UniProt:
W6ZIK1
LinkDB
All DBs
Position
Unknown
AA seq
1871 aa
AA seq
DB search
MSSRVTRSQRRQSGNPHTNSTPNSLPAPPPQPALPPPPTARKRKSAARDDQSPELPDITD
APPARSARNKRSKIDLQDPPQQPKTRSNKAKGKAAAQMSSSGSVPSAYDTHEHALTANSP
PSDPIDEKSTPQPSRRTRGGRKSGPDSSRRQPKPSSHTDPDPDPDTPSTSRRSSRRSNKM
ETDTTMEDAPPVNAEEDARQSSDENSSDDEHADEHGERYDQEEDDDDDDDDDDPFTGGFL
GRNPHSLSALRQLTGIMAGTTQRLRGILEQLRSHDDTVQLTALNELSEVLLISTEDNLAG
HFSPDAYVKELVKLMQPNEFTMEENPEIMLLACRCLANLMEALPQATANVVYGGAVPVLC
SKLLEINFIDLAEQCLSTLEKISIEFPGVIVREGGLTACLTFLDFFATSTQRTAVTTAAN
CCRNIPEDSFPVVRDVMPILENILNNNDQKVVEQGCICVSRIVQSFKQHESKLEELVSPG
LLKAILRLLLPGTTNMIGANIHTMFLQVLAYTAKASPRLSAELLKMNVVDTLYQILTGVS
PPTGTEDVAAKIDSVVIMQALIHRPKDQVFETLNVICELLPDVPQQGLSYLDDLFDAGYP
GDDILPLSSSNKKTMNEKRIQLLEGCKAEVKRFAVILLPTLTDAYSSTVNLSVRQKVLTA
HLKMLSNLDIDILEEALRPVPYASHLASIFTQQDHPSLVTYALQAAELLLKRLESIYRYQ
FYREGVISEIQQLANRPCKTLDSRAKESKSTVGANVTALGDSIASSAEPEAESESGNPND
GVDMEMHSDDEGDEVDLDDDPNASSQNRDDDDESDSSSSSDDQREPPPMPNVEDIITLRA
KKFIETHERDSDKPTRDRAIAVLEDLKTLANEIKACGSKGTASNFMNLFTRLASYFEGDA
LESITSYELKSSKIVDVLLEVFSKPMSSKHVDPRPIFLEAFMGGSGQSKIKTASTASPAT
PFSVLVHKLQDLLSRSEHFDVITVHQNMYDSRGSATSMLAKQLRLKLVADDDSGIPKTYR
NIMVSIHAIATFKALDDYLRPRISLADRPRPAQPRDQFARDQFEAMYAQALAEGRAPPPP
RTPSDPASRAPKKPSRSKPGPPDSPQPGPSSATREKTRRSSRRQQQNPPLPPPPPPPAMP
RSNNGQDPVECADESQLSDPESVDEDSALNAIVDDLEEDLDEDMPDPSAVSVEVASTGKA
TAHQEDGTRIATPVQGTPIAKPPSEARTPASRLSALLQSSAMRQTLGGAASALSYAAAVQ
STPQDWHIEFSVNDQPLSNETTIYRAVHFTRAQPSDGPLRSVWNGIHTIKFKRVQGPPLS
ESSSLTPPPESKSDASGMPASLDEHPVTSGILRLLSILHGLNSHLDDILLANKEQIKLNA
EPLSQFVNTKLTAKLNRQLEEPLIVASNCLPSWSEDLARFYPFLFPFETRHLFLQSTSFG
YSRSMTRWQNSQPTSDSRGDRHRDERPFLGRLQRQKVRISRSRILESAMKVMQLYGHSAS
VLEVEYFEEVGTGLGPTLEFYSTVSREFSKKKLKLWRENESNDSDEYAFGKRGLYPAPMS
EEEANSENGEKRLELFKVLGKFVARSMLDSRIIDISFNPTFFRISDGSSTAVVPSLGAIK
TVDEGLASSLLLLKQFADAKKKVEDSDLSPEEKVVALQEIVIHDCTVEDLALDFTLPGYD
SIELIENGANTAVTIENVDSYVDKVIDFTLGSGVERQANAFREGFTEVFPYSALKAFTPD
ELVMLFGRTDEDWSLETLVDSIKADHGYNLDSKSVRNLLSTMSQFNAQERRDFLQFITGS
PKLPIGGFKALTPMFTVVCKPSEPPFTSDDYLPSVMTCVNYLKMPDYSSVEILREKLSVA
IREGQGAFHLS
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccagagtcactcgctcgcaaaggcgccaatcaggcaatccccacacaaacagt
acacccaactcgctgcctgcaccaccccctcagccagccctcccgccgcccccaacagct
cgtaagaggaagtctgctgcgcgcgacgaccagagccccgagctgcccgacattacagac
gctccgcctgcccgttccgcccgcaacaagcgctccaagattgacctgcaggacccacct
caacagcccaaaacacgctctaacaaagcaaagggcaaagccgccgcccaaatgtcttct
tctgggtctgtgccaagcgcttatgatacccacgagcatgcgctgactgccaatagccca
ccatcagatcccatcgacgagaagtcgacgccacaaccctcgagacgcaccagaggcggc
cgcaaaagcggccctgatagctctcggcggcaacccaagccttcctcccacaccgacccc
gaccccgaccccgacacgccatccacatcccgccgaagttcccgaaggtccaacaagatg
gaaaccgataccaccatggaagacgcccctccagtaaacgctgaagaggatgcccgccaa
tcgagcgatgagaatagcagtgacgatgagcacgctgacgaacacggggagcgctacgat
caagaagaagacgacgacgatgatgatgacgatgatgatcccttcactggcggctttctt
ggacgcaacccccacagtctttctgctctaaggcagctgacaggcatcatggcgggcacc
acacagcgtctgcgtggcatcctggagcaattgcgttcgcatgacgatactgtgcaactc
acggctctcaatgagctttccgaagtactccttatctctaccgaagacaatttggctggc
cacttttctcctgacgcatatgtcaaggagctcgtgaagctgatgcaacccaatgagttc
acaatggaagagaatccagaaatcatgttgctcgcctgccgctgcctcgccaatttgatg
gaggcgctcccccaagctaccgccaacgtcgtgtatggtggtgcagtccccgtcctctgc
tccaagctgctcgaaatcaattttattgacctggccgagcaatgtttgagcacactggaa
aagatttcgatcgaatttcccggagttattgtgcgtgagggcggtcttacggcttgcctc
acattcctcgatttcttcgccaccagcacacagcgaacggccgtcacgactgcggccaat
tgctgtcgcaatatcccagaagattcattccccgtcgtgcgcgacgtcatgcccatacta
gagaacatcctgaacaacaatgaccaaaaggttgttgagcagggctgcatctgcgtgtct
cgcattgttcagagcttcaagcagcacgagagcaaacttgaagagctcgtcagcccaggt
cttctaaaggccatcctacgactcctcctgccaggcaccacaaacatgattggagccaac
atccacaccatgttcctccaggttcttgcatataccgccaaagccagcccgcgtctatct
gcagaattgctcaagatgaatgttgtcgacactctgtatcaaattctcactggcgtctct
cccccaacaggcacagaggacgttgcggccaagattgactctgtagtcatcatgcaagct
cttatccataggcccaaggatcaggtctttgagactctcaacgtcatttgcgagcttctg
cctgatgttcctcagcaaggcttgtcgtacctcgacgacctcttcgacgctggctatccc
ggtgacgacattctccccctttcttcatcgaacaagaagactatgaacgaaaagcgtata
cagctgcttgaagggtgcaaggccgaggttaagcgcttcgcagtcattcttctgcctacc
ctgacagatgcctactccagtactgtgaacctcagcgttcgacaaaaagtgcttactgct
catctcaagatgttgtccaacctcgacatcgacattctcgaggaagccctgcgaccagta
ccgtatgcttcgcatttggcgtcgattttcactcaacaagaccacccttctctggtcaca
tacgctctgcaagctgccgaactgctgcttaagcgccttgaatcgatataccgctatcag
ttctaccgcgaaggtgtcatttcagaaatccagcaacttgcaaatcgtccgtgtaagaca
ttggacagtcgcgctaaagagtcaaagtctacagtaggagccaatgtgacagctttaggt
gatagtatcgcttcttctgccgaaccagaagctgagtccgaatctggcaatccgaatgat
ggagtcgatatggaaatgcattctgatgacgaaggagacgaggtggaccttgacgacgat
ccaaatgcgagcagccaaaaccgagacgatgacgatgaatcggactcgtcctcgtcctct
gacgatcagcgcgaaccaccaccaatgcccaacgttgaagacataatcacccttcgcgcc
aaaaagttcatcgagacgcacgaaagggatagcgacaagcccacacgcgacagggcaatt
gcagtgctggaagatctgaagacgcttgccaatgaaatcaaggcttgtggctccaagggt
actgcaagtaacttcatgaacctgttcacccggttagcatcttactttgagggtgatgcg
cttgaaagtatcacgagttacgagctcaagtcgtccaagatcgtcgatgtgctattggaa
gtcttctcaaagccaatgtcttcaaagcatgtcgatcctcgaccgatcttcctagaagct
tttatgggtggtagtggccagagcaaaatcaagactgccagcaccgcgtctcctgcaaca
ccgttcagtgtcttggtgcacaagcttcaagaccttctgagtaggtccgagcatttcgat
gtcatcactgtgcatcagaacatgtacgacagccggggaagcgcgacctccatgttggct
aagcagcttcggctcaagctcgtcgctgatgacgattcgggcattcccaagacataccgt
aacatcatggtatcaatccacgccattgcaacgttcaaagccttggatgactacctccgt
cctcgtatcagcctcgcagaccgccctcgaccggctcaacctagagaccaattcgctcgc
gatcagttcgaagccatgtacgcccaagctcttgctgaaggtcgggcgcctccaccccct
cgaacaccatctgatccagcgagccgcgccccaaagaagccatcgcgttccaagccaggt
ccaccagattcaccccaaccagggcctagctccgctacacgtgagaagacacggcggtcg
agcagacgtcagcagcagaaccctccgctgcctccaccgccgccgccgccagccatgcct
cgttccaacaacggccaggaccctgtcgaatgtgccgatgagtctcagctctccgatccc
gagtctgtggatgaagatagtgccctgaatgccatagtggacgatctagaggaagacctt
gatgaggatatgccagatccgtctgcagtaagcgtcgaagtcgcatcaacaggcaaagcc
acggcccaccaggaagacggtacgaggattgcaacaccggtacaaggcacaccaatagcg
aagccaccttcagaggccaggactcctgcttcacgactgtctgcactgttgcagagctcg
gctatgcgccaaaccctgggaggagcggcgagcgccctttcgtacgctgccgcggttcag
tccactccacaagactggcacattgagttcagtgtaaatgaccagccactctcgaatgag
accaccatctaccgtgctgtacacttcacgcgagctcaaccatcagacggtccgttgcgc
tcagtatggaatggcattcatacaatcaagttcaagcgggtgcagggtccaccactgagc
gaatccagctctttaacaccgcctccagagtcaaagtccgacgcttcaggcatgccagct
tcattggatgaacaccctgtgacatctggtatcctcaggctactcagcatacttcacggc
ttaaattcccatcttgatgacatcctcctagcgaacaaggagcagatcaaactcaatgcg
gagccgctttcgcagtttgtcaatacgaagcttactgcgaagctcaaccgtcaacttgag
gaacctcttatcgtagctagcaattgcctccctagttggagtgaggatctagcccgcttt
tacccgttcctattcccattcgagactcgccacctcttcctgcaatctacctcttttggt
tactcacgatcaatgacgcgatggcagaattcgcagcccacgagcgactcacgaggcgat
cggcaccgggatgagcgacccttcctgggcagactccagcgccaaaaggtccgcatatca
cgatctcgaatcctcgagtctgcgatgaaggtcatgcagctatacggacactctgccagt
gttttggaggttgaatattttgaagaagttggaactggcttaggaccaaccctcgagttt
tactctactgtttctcgggaattctctaagaagaagctcaagctttggcgagagaacgaa
tcaaatgatagcgacgaatacgcttttggcaagcgaggactataccccgcaccaatgagc
gaagaagaggcgaacagcgagaatggcgagaagcgccttgaactgttcaaagtcctaggc
aaatttgttgcccgttccatgttggactctcgtatcattgacatctccttcaatccaact
ttcttccgcatcagtgacggttccagcacagccgtcgtgccatctcttggggccatcaag
actgtcgatgagggtctagcctcatcgctattactgctcaagcaatttgccgacgctaag
aagaaggttgaggacagcgatctgagtcccgaagaaaaagtggtagctctccaagaaatt
gtcatacacgactgcaccgtggaggatttggcgctcgacttcactctgcccggctatgat
tcaattgagctcatcgaaaatggcgcgaatacagcagtcacgattgaaaatgtcgactcg
tatgtcgacaaggttatagatttcactttgggctccggtgtcgagcgccaggcaaatgct
ttccgtgagggctttacggaggtgttcccgtattctgcactcaaggcctttactccagac
gaactggtcatgcttttcggcaggaccgatgaggattggtctctcgaaacattggtggac
tcgattaaggcagaccacggctacaacctcgatagcaagagcgtgcgcaacctattgtct
acgatgagccaattcaatgcgcaagaacgtcgagactttttgcagttcatcactggtagc
cccaagcttccaattggaggcttcaaggctctcacaccaatgttcacagttgtttgcaag
cccagcgagccaccattcacatccgacgattatctcccgtctgtcatgacctgtgtcaac
tatctcaaaatgccagactacagcagcgtcgaaatactgcgggaaaaactcagcgttgcc
atccgcgaaggccagggtgctttccatctttcttaa
DBGET
integrated database retrieval system