Bipolaris oryzae: COCMIDRAFT_7340
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Entry
COCMIDRAFT_7340 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K20307
trafficking protein particle complex subunit 10
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bor04131
]
COCMIDRAFT_7340
Membrane trafficking [BR:
bor04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
COCMIDRAFT_7340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
DUF7077
TRAPPC10
TRS130_4HB
NTS_TR130
Foie-gras_1
Motif
Other DBs
NCBI-GeneID:
19125259
NCBI-ProteinID:
XP_007690285
JGI:
Cocmi1_7340
UniProt:
W6Z6M5
LinkDB
All DBs
Position
Unknown
AA seq
1541 aa
AA seq
DB search
MSVAGNDTPALGAAEDASRQTPAELTVMDGLSSSKVTVEYHDPSGVFGLIQEDLVAHLPL
RNLHWKAPTRPLRSIDSLHVDLVPSPESAQAAGAASSAVASGQERRHQIPGLRQTPYLRI
YLLRCDDSDAYKSTARKLVREWVKDHTPPSQSSTATNQENHDAYEWLILHVVVPNTPAAS
QPRGSASASTGEKEKTGAASRWTRGTTTLLEKLRADFNVSSKSAPDRVAQIRVPKERVPP
HMLPPAGPASSPAISESPQEQERAWQDVISRFKVLILLSFDLRVSQYEEDIRKNDAQRSF
PGWNFNTFFILKEGLARGFESVGLVEDALLVYDELSIGLDSVIRDQASEQAQGSVLLGYS
DDIYQKAAELAKQEGKNEADPNSPQLAIHDDSPINALRKDYRGLILANNISVFDFRVYIF
ARQMSLLLRLGNSISARSDLATKLQTWPKAGVVQQSTDDSAIGMKSGGQPQEAEDLFSLA
DLCTRALNFITFAGRLLRDDLINGAKAHEITFESYLVENIVRSWTFAALGQVIRETSTSS
LPSDRPTRDASSGSTSKGRSFSGRSKESKSKSSDPKLPSRSSSLNQGRSTPDMPYSQTAP
NAQVVFENGQYHDRPATGQPGTTISARNGLQELAGTRAQLLAIQRRLLEHAGKALGWNIG
WNAIVTSLTVKEELTDVSLDEEEEAERAAEKEASNVKPDSELARARIGISAAALLTAMSS
LGQFRQFYETLSDLIVKHYMAAGQNKSAETVLGDLAALKFELGDFAAAATYFGRMASYFA
TSRWNTVEATMLKMHARCLKKLNRKDEYVRTVLDLLAKSSASRMAAKSSSKRIDTTGDSH
EWLNDDNVDTTDVLHEIVGYSQQLPYDVTVQMAKYFSDISVEPYVRHYDDKDGFQLRLQF
RHLLEDEIEIRAAKIRLVSAISNQAKDVWLEETGTIQLKKGLNRMWIGCNVNTIGPYMVD
RIVLEAKRIVFVHEPFQKTEATTPLGIITSVSAHSLRAAKKARILCFPRTEAFQARIYLS
HLIHIDKPRHIEVEFSSGWNAIKRADIRLKSASAGLRLRTADASIEDGDIELEDNKQTPG
VIAIGEMAAGSAATLKVPYDMETILQDLTVKIDVDYFTENGQFQYTSSFVIPVELPLDVN
VHDHFKNKSLFSKFNIKTANHIPLELLAVSLEGSEEFDVHAPRQPKEPLHVFPKQPVAVT
YKVVKKAVDAAQKRRSRISTTGSLSLSVEYRCLNEDVLDRMRKLFAEAVENSPVHRLSRL
LTDTFVNRIEQSILPQQYEKTALLGRIDLGAFEDMGWADCLESLPIVVRDDTQTWLQKWH
EKHRVVSLETDASPHTTQRPTAPPSPNPPRRMVITVSIPQTHILHTTSLTLTSPSTTLQS
PIATVGQPLTATLRISHTRRWASPTSLVSAANLNDPTDPIDFVYTIDANPEVWLVAGQRR
AYFTATEDQEHEWPIVLIPLRPGNTLLPNVEIRPRIKARPEKGKSDTGDVEILNCETDNL
SFADAVVVAQDVRSSTVGVGDMGMGSMRGVVWLESSGLGDA
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggctggaaatgatacgccagccctgggtgccgcagaggatgcttctaggcaa
accccagccgagcttacggtgatggatgggctctcaagctcaaaagtgacggtcgagtac
catgacccgtctggggtctttggattgatacaagaagacttggttgcacaccttcctctt
cgcaacttgcattggaaagccccgacacggccattgaggtctatagactcgctgcatgtc
gaccttgtgcctagcccagagtcagcacaggctgcgggtgcagcatcatcagctgtagca
tctggacaagagagacgtcatcaaattcccggcctgcgtcaaacaccgtacctcaggatc
tacctgttaagatgcgatgactctgatgcgtacaaatcaactgcgcgtaaattggtacga
gaatgggtcaaggatcacacgccgccttctcagagtagcacagcaaccaaccaggaaaac
cacgatgcatatgaatggttgattctgcatgtcgtagtacctaacacgccagcagcgagc
cagccccgtggatctgctagtgcttcgacaggtgagaaagaaaagactggagcagcttca
agatggactcgcgggacgaccacattgctcgaaaagctacgtgccgactttaatgtttca
tccaagtcagcgccagaccgggtcgctcagatacgagtgcccaaagaaagagtcccgccg
catatgcttccacctgcaggacctgctagctctcccgcaatcagcgaaagccctcaagag
caagaacgagcttggcaagacgtcatatctagattcaaggtgctcattcttctttcattc
gatctgcgtgtgagccaatatgaggaagacattcggaagaatgacgctcagcgctctttt
cctggctggaactttaacactttcttcatcctcaaggagggccttgcgagaggctttgag
agtgtagggctggtggaagatgctttgctagtgtacgatgagctctcgattggcctggac
agtgtaattcgtgaccaagcgagtgagcaggcacaaggaagcgttcttcttggctattcc
gacgacatttaccagaaagcagcagagcttgcaaagcaagaagggaaaaatgaggctgat
ccgaacagtccccaactggctatccatgacgacagcccgatcaatgccttgagaaaggac
tatcgtggtctcatccttgcgaataatatctctgtctttgattttagagtgtacatcttc
gcccgccaaatgtccctgcttcttaggctgggtaactcaatatctgcacgttcagatctt
gcaactaagctacagacttggccaaaagctggcgtagttcagcagtcgaccgatgacagc
gccatcggtatgaaatcaggcggtcaaccccaggaagcagaagatcttttctcgcttgca
gacctctgtacgcgtgcgttgaatttcataacattcgctggaagactcttgcgagatgat
ctgatcaatggagcaaaggcgcatgagattacatttgagagttatctagttgaaaatatt
gttcgctcgtggacattcgccgcattgggccaggtaatacgcgagacatcaacttcttct
cttccatccgacaggcccactagagatgcatcttctggctctacaagcaaaggccgttcg
tttagcggtcgcagcaaggagtcaaagagcaagagctccgaccccaagcttccttctcgt
tcttcttcgctgaatcaggggcgatctacgcccgatatgccgtattcccaaactgcgcca
aatgctcaggtggtgtttgagaatggacagtatcatgatcggccagctacagggcagcca
ggcacaactatttctgcaaggaacggcttgcaggaacttgctggcacacgagcacaactt
cttgcaattcagcgacggttgctcgagcatgcaggcaaggctttgggttggaatatcggg
tggaatgctattgtcacctctctgactgtgaaggaagagctgacggacgtcagtctggat
gaagaagaggaggctgaacgtgcggcagaaaaggaggcttccaatgtcaaaccagattct
gagcttgcaagagcacgtatcggtatatctgctgcggcgttgctcacagcaatgtcgtct
ctcgggcaattccgacagttctatgagacgctgagtgatctcattgtcaagcactacatg
gctgcaggtcagaacaaatcagcagagacagtgctcggtgatttagctgctctcaaattt
gagctgggcgatttcgcagcggcagcaacatattttggacgtatggcctcctattttgca
acaagcaggtggaacactgttgaagctaccatgcttaagatgcatgcgcgctgtctcaag
aagctcaatcgtaaagacgaatacgtgcggacagtactggatttgttggccaagtcatcg
gcgagtcgaatggcggctaagagttcgtcaaaacggatcgatacaacgggcgactctcac
gaatggctcaacgatgacaatgtggataccactgatgtacttcacgagattgtgggctat
tcacagcaattgccctacgatgtcactgtacagatggcgaagtattttagcgacatttcc
gtggagccttatgtgagacattacgacgacaaagatgggttccagctacgtcttcaattc
aggcatctcctcgaggatgagattgagattcgtgcagccaagatcagactagtcagtgcc
atctccaaccaggccaaggacgtatggctcgaagagactggtacaatccagctgaagaag
gggttgaaccgcatgtggattggttgcaatgtgaataccattgggccatacatggtggat
aggatcgtcttggaagcaaagcgcatcgtctttgtccacgagcctttccagaagactgaa
gcaacaacacctcttggcatcatcacatctgtatcagcgcactcgctccgagcagctaag
aaagccaggattctatgctttccgcgtactgaagctttccaagctcgcatctatctttcg
catttgatccacatcgacaagccgcgccatattgaagtcgaattctcgagtggctggaat
gcgataaagcgtgcagatatccgactaaagtctgcttctgcaggactacggctacgcacg
gcagacgcaagcatagaagacggcgacattgaactcgaggacaacaagcaaactcccggt
gtcattgcaattggagaaatggcagccggctccgcggccaccttgaaagtaccttatgat
atggaaacgattctccaggatcttactgtcaagattgacgtcgactatttcaccgaaaac
ggacagttccagtacacttcgtcctttgtgattcctgtcgagctgcctttggacgtcaat
gtacatgaccattttaagaacaagtcactgttctcgaaattcaacatcaagactgcaaat
cacataccactggaacttctggccgtttcgctagaaggatcagaagagttcgatgttcat
gcaccgaggcagccaaaggaaccactacatgtgtttccgaaacagccagtggcggtcacg
tacaaagtcgtcaagaaggccgtggatgccgcacagaaacggagaagccggatcagcact
actggtagtctatcgttatctgtcgagtaccgctgtctgaacgaggatgtgctggatcgt
atgcggaagttgtttgcagaggccgtcgagaacagtccggttcatcgcttgtcgcgtctt
ttgactgatacttttgtcaaccgcattgagcagagcattttacctcagcaatacgaaaag
acggcgttgctgggaaggattgaccttggggcttttgaagacatgggatgggcggactgt
cttgagagcttacctattgtcgtccgtgatgatactcagacgtggctgcaaaagtggcat
gaaaaacacagagtggtctccctcgagacagatgcatcaccacacaccacacaacgccct
acagctccaccgtcaccaaacccaccgcggcgcatggtgataacagtatctatcccgcaa
acacacatcctccacaccacctctctcaccctaacctcaccctctacaacactccaatcc
cccatcgcaaccgtcggccaacccctcacggccaccctccgcatctcccacacccgccgc
tgggcctcacccaccagcctcgtctccgccgccaacctaaatgaccccaccgaccccatc
gactttgtctacaccatcgacgcaaacccagaagtctggctcgtcgccggccagcgccgc
gcctatttcaccgccaccgaagatcaagaacacgagtggcccattgtcctcattccgctt
cgaccgggaaatacgcttctacctaacgtggaaattcggccacgcatcaaggcaagaccc
gaaaaggggaagagtgatacgggtgacgtggagattctcaactgtgaaacggataatctc
agctttgcggatgcagtagttgtcgcgcaggatgtacggagtagtaccgtgggtgtgggg
gatatgggcatgggaagtatgaggggcgtggtttggttggagagtagtgggttgggggat
gcatga
DBGET
integrated database retrieval system