Bipolaris oryzae: COCMIDRAFT_79781
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Entry
COCMIDRAFT_79781 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K11360
transcriptional activator SPT8
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_79781
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_79781
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
COCMIDRAFT_79781
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
COCMIDRAFT_79781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_VPS8
WD_LRWD1
CDC45
Motif
Other DBs
NCBI-GeneID:
19125543
NCBI-ProteinID:
XP_007682206
JGI:
Cocmi1_79781
UniProt:
W7A593
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MNDEDDYENGASSAEDEDEQDDGDVMDVDEEDDADDADDGDGDGDDDDAEGDNDNDDEDQ
DQDQDQDQDQDQDEPDSPSQHPRGNIPNGGTPGRGDGNPAVTFTSPSPHAAAATGVLGNL
PFRPSVRQEALNTPMYDIIPTIAAPHSTSINAITATPDMRWVFTGGSDGYIRKFNWVDTA
NGKLALTVAQRHPFVDSVTKAGVLLSYWENEDSAAGAESLSPVYSLAVHHQALWLLSGLD
SGGINLQSVRHQEGTRIHTLRNHTSAVSVLTLSQDETSVLSGSWDKTINDWDLNTGQVKR
RFETSGGQISAIEQRPISTLPIPQDTETLPLANGTFSSNNAARPRANGSTPNGIDTKPVI
PKDEGIEDAQGSPDDSLFGDKDQDSLFGDGGQENNLSATLPSFGDDDDEFSRAIANGIQQ
ADEDANADLDLVDMGGPVQEPQEPTGEDVKEPNTVTEAMPDANGTADSQSNGAASGLPHA
EDIEQPINTSANQTVQPASSETTFVDASMDGTLRIWDRRQPNPVARITPPRNTPPWCMNA
CWSPDGNFIYACRRNSTVDEYSLHKSLREPRRTFRFPSVSGPVSAVRAMPNGKHLVCASY
DILRLYDLTHEDSGTKTGAAATPFFIVPGHRTGLISQLYLDPVCNFMISTGGNRGWEGAS
TEVMLGYEIGIPS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgaggatgactatgagaatggcgccagctccgccgaggacgaggatgagcag
gacgacggcgatgtcatggacgtagacgaggaagacgatgcagatgatgcagacgacggc
gacggcgacggcgacgatgacgatgccgaaggagataatgataatgacgacgaagaccaa
gaccaggaccaggaccaagatcaagatcaagatcaagacgagccggacagtccttcgcaa
catccgcgcggcaacattccaaatggcggaacacctggtagaggagatggcaatccagcc
gtgacctttacatcgccgagtccacatgccgcagcagcaacgggtgttctgggcaacctg
cccttccgccccagcgtgcgacaggaagccttgaacacacccatgtacgacatcattcct
accattgctgcgccacacagtacctcgatcaatgctattactgcaacacccgacatgcga
tgggtcttcactggaggctcagacggttatatcaggaaattcaactgggtagacaccgcc
aacgggaagcttgctctcaccgtagcgcagcggcatccatttgtggactctgtcaccaaa
gcaggtgttctgttatcttactgggaaaacgaagacagcgcagccggcgctgagagtctg
tcgccagtctactcgctcgcagtccatcaccaggctctttggctgctctcgggcctggac
tcgggaggtatcaacctacaatcagtgcggcatcaagaaggaacccgcatccatacgttg
aggaatcatacatcggccgtgtcggtcttgacattatcgcaggatgagacgtcggtgctt
agtggcagctgggacaagaccattaacgactgggacttgaacactggtcaggtcaagagg
agattcgaaacgagtggtggtcaaatatccgccattgagcagcggccaatatctacactg
cccataccccaagacactgaaaccctccctctggccaatggtaccttttcctcaaataac
gccgctcgccctcgagcaaacggaagcacccccaatggcatcgacacgaagcctgtaata
cccaaggatgaaggtatcgaggatgcccagggctctccagatgactcgctgttcggagat
aaggatcaggactctctgtttggtgacggtggccaagagaacaacctatcagcaactctg
ccttcattcggggacgatgacgacgagttttcaagagccatagcaaacggcatacagcag
gcagatgaagatgccaatgccgatttagacttggtggatatgggcggccctgttcaagaa
ccccaggagcctacaggcgaagacgtaaaagagcctaacacagtgactgaggcaatgcca
gatgcaaatggcacagccgactcacagtcaaatggcgcagcaagcggactacctcacgca
gaggacattgagcaacccattaacacatcagcaaaccagactgtgcagccggcatcgtcc
gagacaacctttgtagatgcatccatggacggcacactgcgcatctgggacaggcggcag
ccgaaccccgtcgcgcgtatcacgccaccgcgcaacacacccccgtggtgcatgaatgcc
tgctggtcgcccgatggcaacttcatctacgcatgcaggagaaacagtaccgtggacgaa
tacagcctccacaagagtctgcgagagccaaggcggacattcaggttccctagcgtcagt
ggccctgtcagcgctgtccgggctatgcctaatgggaagcatctcgtgtgcgcctcatac
gacattctccgtctctatgacctcacgcacgaagactctggtaccaagacgggtgctgct
gcgactccctttttcatcgtgcccggtcatcgcacaggcctcatttcccagctctatctc
gacccggtttgcaactttatgatttctacgggcggaaacaggggctgggagggtgcgtcg
acggaggtcatgctgggctatgagattggcatcccttcgtag
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integrated database retrieval system
