Bipolaris oryzae: COCMIDRAFT_81104
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Entry
COCMIDRAFT_81104 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14307
nucleoporin p58/p45
Organism
bor
Bipolaris oryzae
Pathway
bor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCMIDRAFT_81104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_81104
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCMIDRAFT_81104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup49_C
Nucleoporin_FG
TetR_C_43
DUF1664
MIP-T3_C
PUMA_CC
Tmemb_cc2
Motif
Other DBs
NCBI-GeneID:
19125802
NCBI-ProteinID:
XP_007682710
JGI:
Cocmi1_81104
UniProt:
W7A3V5
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MAGFGRSNSLSINTGGGGGLFGSNASTQQQTPQQPQQSGSLFGNLNKPTTTAPASAGLFG
ASTAQPSQPQSGGLFGGALGGNTQNQAQNITQSSGLFGGAQSKPSLFGASTQPVTTPSLF
GNNTANQQNQTSTPSLFGSTQQQSQQQQQSTLGGGMNFPNRTNPLGGSTLGGTQMGASAQ
PVQLTLDSIRGTTRFNDLHPELQTLIQQFDEGVQRKINYCSQIRESLPGNERDISSIAPD
VAYIETFLSTVEVGLDNDSANIAHLKSLVKKDAEDATLSFRAIENQRLPAQFHYRNNGNL
TTSSAKTPATNALDDDDPTKPVDLMSYFDRRTDELGRTLDVYQRQIREIEAHLRTMEAGT
VEKAQQLTGSRSAPRDQRRELVEALKAIEGAILDSAKKVGQVRDDVTKQTLGSVGAALL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctttggacgctccaattcactgagcattaacactggcggtggcggtggcctt
tttggcagcaacgcctccacacagcagcagacaccacagcaaccccagcagtccggctcg
ctgtttggtaatctaaacaagcctacaaccaccgcccctgcaagtgcgggactctttggc
gcgtctacagcgcagccgtcacagccccaaagcggaggtctgtttggcggcgcgctgggc
ggaaacacacagaaccaggcccagaacatcactcagtcaagcggtctgtttgggggtgca
cagtctaagccttcgttattcggcgcatccactcaaccagtaaccacaccctcattgttt
ggaaacaacaccgccaaccagcagaaccaaacgtccaccccctcactattcggctcaaca
cagcagcagtcccagcaacagcaacagagcaccttgggcggaggcatgaacttccccaac
aggaccaaccctcttggcggctctacacttggggggactcagatgggcgcgagcgcacaa
ccagtccagttaaccctggactcgatacgaggaactacacggtttaacgacctgcacccc
gagctacaaacattgatccagcagtttgacgagggtgttcagcgaaagatcaactactgc
agccaaatccgcgaatcgctccccggtaatgagcgcgacatctctagcatcgcacctgat
gtagcttacatcgagacctttctctccacggtcgaagtgggactcgacaacgactcggca
aatattgcccatctgaaaagccttgtcaagaaagacgccgaagatgcgactctgagcttc
cgcgcaatcgaaaatcagcgactacccgcccaatttcattaccgcaacaacggcaatctc
acgacctcgagcgcaaagacaccagccactaatgcgctcgacgatgatgatccaacaaag
cccgtggatctgatgagctattttgaccgccgaactgacgagcttggccgcaccctcgac
gtttaccagcgacaaatccgcgagattgaagcccatttgcgcacgatggaggcgggcacg
gtagaaaaggcccagcaattgacgggcagccgaagtgctccacgcgaccagcggcgcgag
ttggtcgaagcactcaaggccatcgaaggtgccatcttggactctgcaaagaaagtggga
caggtcagagatgatgtcaccaagcagacgctaggcagtgttggtgctgctctgctttga
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