Bipolaris oryzae: COCMIDRAFT_81485
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Entry
COCMIDRAFT_81485 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bor03016
]
COCMIDRAFT_81485
Enzymes [BR:
bor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
COCMIDRAFT_81485
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
COCMIDRAFT_81485
Transfer RNA biogenesis [BR:
bor03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
COCMIDRAFT_81485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cupin_8
Kelch_4
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_5
JmjC_2
Motif
Other DBs
NCBI-GeneID:
19125878
NCBI-ProteinID:
XP_007682885
JGI:
Cocmi1_81485
UniProt:
W6ZSR2
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MVTDAGARPKKVSAKRKGNQKSLRERRDIDIMNTNDSSIVSKRSVSKLYLSHEPDFYEPF
VPKFVRRNPLINRGYWLRMHAIEQAVHRFLEEENGKSKVVVNLGCGYDPLPFQFWHRYTS
LAQSATFVDVDYPQLMEKKRDRMLSNDLLRNALLKTKLRQTEQPILLRSDSYMALGCDLK
DLATLEKVLRAEFDISATSILFVAEVSVTYMPLKDSDALIQWASTIGDARFCILEQYLPQ
GPEHPFAKTMLSHFDKLQASIKAVKLHSSLDQQAARFRNAGWPTLVMARNLWDLWSDDSF
TPSSLRRTINATEPFDEWEEFALFGGHYFLLVASNVETQGSNEPIHQEIATKSVNDTNAG
SITLHCWKQHTDATLTPRRFSAAFTLDNGTVVLHGGQGTQTRLADMDMLRQEDSDQDRAI
QPGNLLPTARMCHAITLMQDGEALLVGGRGSPTQACADCWLFKHGTWTKVDDLVPARYRH
SAVAVQLGSGEAQTHGVLVFGGKASDGTVLDANDYCALWTANTGWHSISVDGTHPSPRFG
AATCTINSARNCGLLTGGGNESGVVVDDALWEWSISATPTPRVSFKDRTNDMRSSLTNSA
YARIGSALVPWNDALLMIGGVSKKNIHSLSDDFLLLTCKDTIIQVEHPSVHVLPHTSWPL
LVGVGAVSPSRGEIVLAGGGAVCFSMGSYWNQDPISILPGATQGAKSWRRVGPSQAGSGT
AGTKGTGQANAAETRRDGRREKASGKKRPVMAARTAEIQRTQVSSSDDFARLVASSKPAI
ITGLDIGPCTDLWTLDYLKEKIGPEREIVVHECSSDRMTFKDKNFSYVKKSTADFLNCIA
KGSHEYLRAVSSSQPNKLPTKLEEDFPSIADDFRIPDVCDVVKENYHSSPLRISGPVSLW
LHYDVLSNILCQVHGKKTLFLYPPSDVSLLDFPPGGSSSNTDVLTSKNHKLRRTHPHVAS
LAPGDILFIPPMWSHTATPEDGVSVAVNVFWRGLDKGYAAGKDVYGNRDLQAYENGRRDV
EKILRAFKDIPGDVARFYLERLAGEILEKAQKIGGEKDVKHDEEKV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggtgacagatgccggtgcgcggcccaagaaggtctccgctaaacgcaagggcaatcag
aagtctctgcgcgaaagaagagatattgacattatgaatacaaatgatagtagcattgta
tctaagagaagcgtttccaaactgtatcttagccacgaaccggacttttacgagccattt
gtgccaaaatttgttcgtcgtaacccgctcataaaccgcggctattggctgcgaatgcac
gccattgagcaagcagtccatcggtttctggaagaagaaaatggcaagtcaaaagtcgtt
gtaaatcttggatgtggatatgatcccttgcccttccagttctggcacagatatacctct
ctcgcacaatcggctacctttgtagatgttgattatccgcaattgatggagaaaaagcgg
gatcgcatgctaagcaatgacctccttcgaaacgccctgttgaagaccaagctccgtcag
actgagcagcctatacttcttcgcagtgacagttatatggcgctaggctgtgatctcaaa
gatcttgcaacactcgaaaaagttcttcgagccgagtttgatatttcggcaacttcaatt
ttatttgttgccgaagtgtctgtgacttacatgccgctcaaggactctgatgcactgata
cagtgggccagcaccatcggagacgcccgcttctgtatactagaacagtatcttcctcaa
ggcccagaacaccccttcgctaaaactatgctctctcactttgacaaattgcaggcgtca
atcaaagcggttaagctacattcatcactggatcaacaagcagctcggttccgcaacgcc
ggttggccaacgcttgtcatggctcgtaatctgtgggacctctggtccgatgattcgttt
accccttctagcctcagacgtacgatcaatgccactgagccgtttgacgagtgggaggaa
ttcgcgctattcggcggccattatttcctgcttgtcgcctccaacgtggagacacagggg
tcaaatgagccgatccaccaggagatagccactaagagtgtgaatgacacaaacgcgggg
agtattaccctgcattgttggaagcagcacactgatgctaccttgacgccgcgccgtttc
tcggcggctttcacactggacaacggtacagtggtccttcacggaggacagggaacgcaa
acccgtctcgctgatatggacatgctgagacaggaggactctgaccaggatcgtgccatt
caacctggtaatctgctacctactgcacgcatgtgccatgcaatcacattgatgcaagat
ggtgaggcgttgttggtcggaggacgtgggtcacccacccaagcatgcgcagattgctgg
ctcttcaagcatggaacttggaccaaagtagatgatctcgtcccagctcgttatcgtcac
tcagcagttgctgtccaactaggatctggcgaggcacagacgcatggagtgctagtattt
ggcggcaaagccagtgacggcacagtacttgacgccaacgattactgtgctctgtggact
gccaacaccggctggcacagcatttccgtcgacggaacgcacccgtctccacgttttggt
gccgcaacgtgtacgataaactcagccagaaactgcgggttgctcacaggaggcggcaac
gagagcggcgtggttgtcgacgacgccttatgggagtggtccatttccgccacaccaaca
ccacgagtgagcttcaaggaccgcaccaatgacatgcgcagtagcctgacaaattctgca
tacgcgcgtataggctctgctttagtcccctggaacgatgctctgttgatgattggaggt
gtctcgaagaagaatatccacagtctatcagacgactttctgctcttgacatgcaaggac
acgatcatccaagtggagcatcccagcgtgcacgtcttgccccacacgtcgtggcctttg
ctagtgggtgtaggagccgtttcaccctctcgaggcgagattgtgcttgcaggaggagga
gcggtatgtttttcgatgggcagctactggaaccaagatccgatttccatcctccctggc
gctacgcaaggggccaagtcgtggcgtcgtgttgggccgagtcaggctggcagcggcaca
gcaggcacaaaaggcacaggacaagcgaatgcagctgaaacaagacgtgatggtcgtcga
gagaaggcaagcgggaaaaagaggcctgtaatggcggcacgtacggccgagatccaaagg
acccaggtcagttcgtcagatgactttgcgagactcgttgcctcctcgaaacccgccatc
atcaccggccttgacattggcccgtgcacagatctttggactctggactacctgaaagag
aaaattggtccagaaagggaaatcgtagttcatgagtgctcatccgatcggatgactttc
aaggacaagaatttctcctacgtgaagaaatccaccgccgacttcctcaactgcatcgca
aaaggctcccatgaatatttgcgtgctgtatcatcgagccaaccaaacaagctacctaca
aaactcgaagaagatttccctagcattgctgatgatttcagaatcccagatgtatgtgac
gtagttaaggaaaactatcacagctctccgctccgcatctcaggcccagtgtctctatgg
ctacactacgacgtcctatccaacatcctatgccaagtccacggcaagaagacactgttt
ctctacccaccctctgatgtttccctcttggacttcccaccgggaggttcctcatcaaac
accgatgtcctgacatccaagaaccataagctacgtcgtacacacccgcacgtagcgtct
ctcgcgcccggagatatcctcttcattcctcctatgtggagtcacacggcgacgccagag
gatggtgttagtgtcgcggtgaatgtgttttggagaggcctggataaggggtatgcggcg
ggcaaggatgtctatgggaacagggatttacaagcctacgagaacgggaggagggatgta
gaaaagattttgagagcattcaaggatataccaggggatgtggcgaggttctatcttgag
aggttggcaggggagattttggagaaggcacagaaaatcggcggggagaaggatgtgaag
catgatgaagagaaagtgtag
DBGET
integrated database retrieval system
