Bipolaris oryzae: COCMIDRAFT_82370
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Entry
COCMIDRAFT_82370 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
bor
Bipolaris oryzae
Pathway
bor03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCMIDRAFT_82370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_82370
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
COCMIDRAFT_82370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_WDR75_2nd
WDR90_beta-prop_4th
DUF7283
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Inhibitor_I34
Motif
Other DBs
NCBI-GeneID:
19126037
NCBI-ProteinID:
XP_007683226
JGI:
Cocmi1_82370
UniProt:
W6ZS63
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MADATPQLKRKREEAAAQKKAKKQRKEEAAAALKDGRNGEPTISATDSTPKSTKTTTPKK
QSKSATQINGVDKDATNGTPTSAQKAKKPQAQHNGSIDDDEAQAASATVNGIATEVAQAE
KEKPNGVANVVDKAARKKAKKERREKNKAERNDLGTTETLELVKKKKNKKLGTWVVSPAQ
GGWYLPADPVFSKDEKYLIVANLKSLCVYATDTSLLVSELLDNETGSLTAYALSAVAPHL
IYAAYSSGEIMLWDWVTGKKIEQWDIGTTVQNMAVITQPESDQDLVYCHEAEDGHSLTLR
SLRIKSQSSAGESKSDLKQILNTSSAIRGIQVLLQGKYVIVATVDSLIVGKRVKITKTAL
HEFEYVWRELKFSKHIRTFNVYHREKQEASNGKKGAQDQRDILDIAVGEETGLILLFEDI
LASFAAIESSQKGKKERTDTAESLRPKRLHWHRDAVGSVKWSLDGNYIVSGGDETVLTIW
QLATGLPQHLPHLSAAIENIVVSPTGSAYALTLANNSVIVLSTTELEARTNIVGIQSRRI
DTEQMPKETRSGNKYLGIFEAVPMTVDPTNPNEVSLAVPSSQPRQKKGGLKPEPYLQTFD
LANQRAKSRQALTRNNATEPNVAPDGGRIEEPNVTHIQISHDGEWLATVDEWLPPKSDTR
YLNEGIPEFNEQERLNRREVYLKIWRRDNSSGQWKLETRIDAPHFFEDRCGNGRVYDLVA
DPTGAGFATVGEDHVVRTWKPKTRLRDGVIVRGAQQEGLITWSLDHAVEISDKLDITEGS
QQSLPPRTSRLAYSADGSVLAMSVSWDFEEDAGVTHLIDTSSGSIRRSLTEIDVTALSGL
GFVGQYLVVVADVITVWDMVADQLVYSVSIETPGLDRLERVPLVRLATNETDATFAVALP
RLEKSELHGSKIKKASSKVLIYSPEHHKALWRETLSPMNLALASRRSESGYIVLDSRSCL
KTISPSAGPLQLLTPPPEEQLEAHRITHPDEVDMEDDESERPLANLLVSEDLTQDIGQDE
HVFNMQDLQNVLHDGSVPPPPQGLFSNILALIGGKTQKVSA
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcaactccccaactaaaaaggaagagagaagaagctgcggcgcagaaaaag
gccaagaagcagaggaaagaagaggccgcggcggccctcaaggacggtcgcaatggcgaa
cccacaatctctgcgactgattcgacccccaaatctactaagacgactaccccgaagaag
caatcgaaatcggcgacgcagataaatggtgtagacaaagatgcgaccaacggtactccc
acaagtgcgcagaaagccaagaagccgcaagcacagcacaacggatcgatagacgatgat
gaggcacaagctgccagcgcaacagtcaacggaatcgctactgaagtggcgcaagctgag
aaagagaaaccaaatggagtagccaatgtggtggacaaggcagcacgaaagaaggcaaag
aaggagagaagagagaagaacaaagcagagcgcaacgaccttggcacgaccgaaacattg
gaactagtcaagaagaagaagaacaaaaagttgggaacttgggttgtatcccctgctcaa
ggaggatggtatttgcctgcggacccagtgttctctaaagatgagaaatacctaatcgtt
gcgaatctcaagtcgctgtgtgtctatgccacggatacatctttacttgtcagcgagctc
ttggacaacgaaactggatcactcacggcatatgctctttccgctgtagcgccacaccta
atctatgccgcctactcgtctggagaaatcatgttgtgggactgggtaacgggtaaaaag
atagagcaatgggacattggcactacggtccagaatatggctgttatcacacagcctgag
tctgatcaagatctcgtgtactgccatgaagccgaagatgggcatagccttactctccgc
tctcttcgcatcaaaagccagagttccgccggcgaatccaagtcggaccttaaacagata
ctcaacacgagttctgcaatccgcggtatccaggttctcctgcaaggcaaatacgtcatt
gttgcaactgtcgattcgctcattgtcgggaagcgcgtcaagatcaccaaaacagcgctt
cacgaatttgagtacgtctggcgcgagctgaagttctcaaagcacatcaggaccttcaat
gtctaccatcgcgagaagcaggaagctagcaacggaaagaaaggcgcacaagatcaaagg
gatatccttgacattgctgttggtgaggagactggcctcatcctcttgttcgaggatatc
ttggcctcctttgctgcgattgaaagcagtcagaagggcaaaaaagagagaacagatact
gctgaaagtctcaggcctaagcgcttacactggcacagggatgcggtgggatccgtcaag
tggtcattagatggcaattacattgtttctggtggtgacgagactgtccttacgatctgg
cagcttgctacgggactaccgcaacacctacctcacttgtcggcagctattgaaaacatc
gtagtctctcccacgggttctgcgtatgctctgacacttgctaacaactcggtcattgtt
ctgtctacaaccgagctcgaggcgcgcaccaacattgttggcatccagtcacgaagaatc
gatactgagcaaatgccaaaagagaccaggtctggcaacaagtaccttggaatcttcgaa
gcagtacctatgactgtagaccccacaaaccccaacgaagtatcacttgcagtgccttcg
tctcagccccgtcaaaagaagggaggcctgaaacccgagccatacctacagacgtttgat
cttgcgaaccagcgtgccaagagccgacaggcattgacacgcaacaatgcaacagagcct
aatgttgctcctgacggcggccggatcgaagagcccaacgttacacacattcaaatcagc
cacgacggagaatggcttgcgacagttgatgaatggcttccaccaaaatcggatactcgt
tacctcaatgaaggtattcccgagttcaatgagcaggaacgcctgaaccgtcgagaggta
tatctgaagatctggcgacgcgacaacagcagtggacaatggaagttggagactcgaatc
gacgcaccacacttcttcgaggacagatgtggcaatggccgtgtttatgatcttgtcgcc
gaccctactggtgctggctttgcgactgtcggcgaggatcatgttgtaaggacctggaag
ccgaaaacgcggttacgcgatggtgttatcgttcgcggggctcagcaagaaggtctgatt
acctggtcgcttgatcacgcagttgaaatcagtgacaagcttgatattaccgaaggatca
cagcagtctttgcctcctcgcacctcgcggttagcctattccgcagacggatcggttctt
gctatgtctgtttcttgggatttcgaagaggatgcgggagtaacgcatttgattgacacc
agcagcggatcaattcgacgatcgttgacagagatcgatgtgactgccttgtccggtctt
ggattcgtcggacagtacttggtagtagtcgcagatgtcattaccgtctgggatatggtc
gccgaccagcttgtatacagcgtctccatcgagacccctggccttgaccgcctggagcgc
gtgccactggttcgacttgctacgaatgagacggatgctacgtttgctgtagcactacct
cgactggaaaagagcgagttacatggctccaagatcaaaaaggcgtcatctaaggtcttg
atctacagcccggagcatcacaaagcactgtggagggagaccctgtcgcctatgaaccta
gctcttgcatctcgaagaagcgagagtggctacattgtcctcgactcacgctcttgcctc
aagacgatcagcccaagtgctggtcctctgcaactcctcaccccaccacctgaagagcag
ctcgaggcgcaccgtatcacccatccagatgaggttgacatggaagatgatgagtctgag
cgacctctcgccaaccttttggtgtcggaagatctcactcaggacattggtcaagacgaa
catgtgtttaacatgcaggacctacaaaatgtgctgcatgatggctccgtgcccccgcct
ccacagggccttttcagtaatattctggcgttgattggtggcaagacacaaaaagtatcg
gcatag
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integrated database retrieval system