Bipolaris oryzae: COCMIDRAFT_82451
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Entry
COCMIDRAFT_82451 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
bor
Bipolaris oryzae
Pathway
bor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCMIDRAFT_82451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_82451
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCMIDRAFT_82451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
19126052
NCBI-ProteinID:
XP_007683197
JGI:
Cocmi1_82451
UniProt:
W6ZEP1
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MSLFGNLGGSQPASTGTSGGGLFGTAGGASGGTTSSLFGNLGGGTSNAQSGTTQATSSGG
LGGGLFGGLGAAKSTATTTPSLFAGAASTTQPQQQSQPQTGGFSLFSNTAAQPTTNNTQQ
TGGLGQSSLFNTTSTQQQTQQPQQQGASLAQANAGSGRSAHFDHLLERGRKRNAGENGIS
NFDELPSLQLGLGDIARKVRNLGSGGPSADQVQDRAQDRAAHYLLSASGVKMGSTLRDLN
QFSSQAGLATPGQAQSLFDNDVDGYISNLHSQSTLALIQEGLEQSKRDFDTFLEDNVQIE
WDKQRQRIYEHFGLGRQSEDMAASQSAFGSTARGAFGRATARKGRSMGPNGASVNGRSTF
GASAAGPPVLGASQSVLGGRDVSDKSVMGGQVGLQDRYARDKQEKFMDEVKRLNEARLRE
ESFSVLHSFSSVEKAAGTEYSDHFINAYGALVSITGEKTEAEASNPGSNQPKERSFAKDY
LDDQPNSVASVRMRKRILDGSRKYLENKFLEQVDEVLRKNPSEALVGGVPSMLNKIRGFV
RAKAAFKELGADTELFQRIGEAGDEFPWIIIFFLLRGGLLTEAAEYVREKRNFFQNTDRN
FQLAITQYATDPDRRLSPDTQQKVGHTHAQRTRLKTPEDPYRMACYKIVGRCDMSKRNLE
PIKETMDDWVWLQFNLAREGNRAEENAGEIFGLEELRTTIKDIGQRHFMNDTAESAGGYG
VYFYLATLAGLFEPAVNYLYTHNYVSAVHFAIALDYYGLLRVSDWTTAGGEILTYTTRQQ
PQLNFGRVVGYYTSDFRAARADAAADYLVLICMNADLPGEAGRQQADLCHEALRELVLET
REFSTLLGDVKSNGQTTPGLIQERVPLLKLDGETGLLNTITSEAARMADDNGRINDAILL
CHLAGEYDSVVTILNRALAEALSVELGQEPLRLEPLKPRLNAGESQQQQQQSDASSSLSM
LGTDDPVELAQKVLALYNANSLWWKKVSQVNREAVGILFQLNNAKKVIEAGDYMAALGQI
ENLRILPLSAGGNVSDIRAAANSFNSYPQEISRNIGNVLLWCIGCCSRHREHLLSGQFED
QMRKVLADQLLQKAKDLMVFAGLIKYKLPPRVFETLAREGLEVGAF
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgttcggcaatcttggaggctcgcagcctgcttctactggaacctcgggcgga
ggcttgtttggaacagcaggaggcgcatcgggcggcacgacatcgagcttgtttggcaat
ctgggcggaggcacatccaatgcgcaatctggcacgacgcaagcaacaagcagcggaggc
ctaggcggtggtctgttcggcggccttggtgcagcaaagtcaactgctaccacgacaccc
tcgctgttcgctggcgcagcatcgacaacgcaaccccagcagcaatcgcagccacaaacg
ggcggcttctctctgttcagcaacacggcggcacaaccgactaccaataacacgcaacaa
acgggcggccttggccagtcctcgctcttcaataccacctcgacccagcagcagacacag
caaccccagcaacagggcgcgtcgctggcccaggcaaacgcaggctccggccgctccgct
catttcgatcatctcctggaacggggacgtaagcgcaatgctggcgagaatggcatcagt
aactttgacgagctgccgtcgctccagttgggccttggcgacattgcacgcaaggtgcga
aacttgggttctggaggcccttcggcggatcaggttcaggatcgcgctcaagaccgcgct
gcccactacctgctctcggcttctggcgtgaagatgggcagcaccctccgagatctcaac
cagttctcttcccaggcaggcctcgctacacctggccaggctcagagtctcttcgacaac
gacgtagatggttacatctccaacctgcattcgcaatccaccctagccctcatccaagag
ggactagagcagtccaagcgcgacttcgacacatttctcgaggacaatgtacagattgaa
tgggataaacagcggcagaggatctacgagcattttggtctgggcagacagagcgaagat
atggcagcctcgcagagcgcctttggcagcacagctagaggggctttcggacgtgctaca
gcacgtaagggtcgttccatgggccctaatggagcatcagtcaatggacgatcgacgttt
ggagcttccgctgccgggccacctgtccttggtgcttctcaaagcgtgctgggtggccga
gatgtctctgacaagtccgtcatgggcgggcaagttggactccaagaccgatatgcacga
gacaagcaagagaaattcatggacgaggtcaagaggctcaatgaggcaaggttgcgcgaa
gagtcgttctccgtgcttcactctttctctagcgtagagaaggctgctggcactgagtac
tcggatcatttcatcaacgcttacggagcacttgtttctattactggtgagaagactgaa
gcagaagcatccaaccctggttcaaatcagcccaaggagcggagctttgccaaggactat
ctggacgaccagcccaactctgtcgcgagcgtgcggatgcgcaagcgtatactagatggc
tctcgcaagtacctagaaaacaagttcctggaacaggtagatgaggttttgcgaaagaat
ccgtcggaagcgcttgttggaggtgttccgtcgatgctcaacaagattcgtggatttgtc
agagccaaagctgcgtttaaggagctcggtgcagataccgagttgttccaaaggatagga
gaagcaggagacgagttcccatggatcatcatcttcttcttactcagaggtggtcttttg
acggaagctgccgagtatgtccgagagaagagaaacttcttccaaaacaccgatagaaac
tttcaattggcaatcacacagtatgctacggaccctgaccgtagactgagcccggacact
caacaaaaggtgggccacacacatgctcagaggactcgtttaaagacgcccgaagatcct
tatcgcatggcctgttacaagattgtaggccggtgcgacatgagcaagcgcaacctggag
cctatcaaggagaccatggacgactgggtgtggctgcagttcaacttggctcgtgaaggc
aacagagccgaagaaaatgcaggcgagatttttggcttggaagagctgcgaacgacgatc
aaggacattggccaacgtcacttcatgaacgacacggcagaatctgctggtggatacggg
gtatacttctatcttgctacgcttgctggcttgttcgagcctgccgtcaactatctctac
acgcacaactacgtatctgcggttcatttcgccattgctctggactactatgggctcttg
cgggtttcagattggacaacagctggaggcgagattttgacctacacaacacgacaacaa
ccgcagttgaactttggacgagtggttggatactacaccagtgacttccgggcggcccgg
gctgatgctgcagctgactacttggtgttgatatgcatgaacgcagacctaccgggtgaa
gcgggcaggcagcaagcagacctttgccacgaggcactccgtgagcttgttcttgagaca
cgcgagttttccacattgctgggcgatgtcaagtcgaatgggcaaacaacgcctggtctc
atccaagagcgtgtgccattactgaaactcgacggcgaaacgggtctgctcaatacaatc
acgagcgaagcggcaagaatggcagatgataatggacgcatcaacgatgccattctgctg
tgccacttggccggcgagtatgacagcgtggtgacaattctcaaccgtgcgcttgctgag
gctctttcggtagagcttggtcaagagcctcttcgtctggaaccactcaagccacgcttg
aatgcaggcgagtcgcaacagcagcaacagcagtcggacgcgtcgtcaagcttgagcatg
cttggaacagacgatcctgtggagcttgctcagaaggtcctggctctatacaatgcaaat
agtctgtggtggaagaaggtttcgcaggtgaaccgtgaagcggtaggcatcctgttccag
cttaacaatgccaagaaggtgattgaagccggcgactacatggcagcactcgggcaaatc
gagaatctccgcatccttccgctgtctgctggaggcaacgtcagcgacattcgggccgca
gccaacagcttcaactcgtatcctcaggagatatcgcggaatattggcaatgtgctacta
tggtgcattgggtgctgttcaaggcatcgggagcatcttctttctggacaatttgaagac
cagatgcgcaaggtgctggctgaccagttgctgcaaaaggccaaggacctaatggtattt
gctggtttgatcaagtataagcttccgcctagggtgtttgagacgttggcgcgagagggt
ctggaagttggcgctttctga
DBGET
integrated database retrieval system