Bipolaris oryzae: COCMIDRAFT_83128
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Entry
COCMIDRAFT_83128 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
bor
Bipolaris oryzae
Pathway
bor04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
COCMIDRAFT_83128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_83128
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_83128
04131 Membrane trafficking [BR:
bor04131
]
COCMIDRAFT_83128
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bor04147
]
COCMIDRAFT_83128
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
COCMIDRAFT_83128
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
COCMIDRAFT_83128
Membrane trafficking [BR:
bor04131
]
SNARE
SNARE associated proteins
Others
COCMIDRAFT_83128
Autophagy
Aggrephagy
Other aggrephagy associated proteins
COCMIDRAFT_83128
Exosome [BR:
bor04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
COCMIDRAFT_83128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
AAA_2
AAA_5
TIP49
AAA_22
CDC48_2
AAA_14
RNA_helicase
Mg_chelatase
ATPase
nSTAND3
AAA_7
AAA_28
Parvo_NS1
NPHP3_N
AAA_17
IstB_IS21
AAA_25
AAA_18
AAA_24
DUF815
Vps4_C
ResIII
PhoH
ABC_tran
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
19126191
NCBI-ProteinID:
XP_007683553
JGI:
Cocmi1_83128
UniProt:
W7A1K6
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MSAEPDHTKPKPDLSKNPDGAEPKENDETATAILKKKKKPNSLIVTDAVNDDNSIIALSN
NTMETLQLFRGDTVLVKGKKRKDTVLIVLADDDLDDGSARINRVVRHNLRVKHGDVITIH
PCPDIKYAKRIAVLPIADTVEGITGSLFDVFLAPYFREAYRPVRQGDTFTARGGMRQVEF
KVVEVDPPEFGIVAQDTVIHCEGEPIQREDEEGNLNEVGYDDIGGCRKQMAQIRELVELP
LRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESE
SNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVV
MAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIMQIHTKNMKLADDVDLQTIAAET
HGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPSA
LREVAVVEVPNVRWEDIGGLEDVKRELIESVQYPVDHPDKFLKFGMSPSRGVLFYGPPGT
GKTLLAKAVANECAANFISIKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSI
AKSRGGSQGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDNALCRPGRLDTL
VYVPLPDLASRVSIIKAQLRKTPVADDVDIDFIAQNTHGFSGADLGFVTQRAVKLAIKQS
IAIDIERRKAREAAGEDVDMEVDEEDPVPVLTKAHFEEAMRSARRSVTDVEIRRYEAFAQ
SMKNSGGSSFFRFPDAENAAAGGDQNTFGAGGEDEDLYN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgaaccagaccacacgaagccgaagccggatctctcaaaaaacccggacggc
gctgagcccaaggagaacgatgagaccgcgaccgccattctcaagaagaagaagaagcca
aactcgctgatcgttaccgacgccgtcaacgatgacaactctatcatcgccctctcaaac
aacaccatggagaccctccagctcttccgtggtgacacagtcctggtaaagggcaagaag
cgaaaggacaccgtcctcattgtgctcgctgatgacgaccttgatgacggctcagcgcgg
ataaaccgtgttgttcgccacaacttgcgggtcaagcacggcgacgttatcaccatccac
ccgtgccccgacatcaaatatgccaagcgcattgcagtcctccccatcgccgacacggtc
gagggtatcaccggttcgctcttcgatgttttccttgccccatacttccgcgaagcctac
cgaccggtccgccaaggcgacaccttcacagcccgtggtggtatgcggcaagtcgagttc
aaggtcgttgaagtcgacccaccagagtttggtatcgtagcgcaagataccgtcatccac
tgcgaaggcgagcccatccagcgtgaagatgaagagggcaacctcaacgaggtcggctac
gacgacattggtggctgccgaaagcagatggcacagatccgagagttggtcgagctgcca
ctgcggcatcctcagctcttcaagtcgatcggtatcaagcctccacgtggtattctcatg
tacggacctcccggtaccggtaagacactgatggctcgtgccgttgcaaacgagactggt
gccttcttcttcctgatcaacggtcccgagatcatgtccaagatggctggtgaatcagag
tcaaatctgcgcaaggcatttgaggaggccgagaagaactcgcccgctatcatcttcatt
gatgaaattgattcgattgcgcccaagcgcgagaagaccaacggtgaagttgagcgccgt
gttgtctctcaactgcttaccctcatggacggcatgaaggctcgctccaacgttgtcgtc
atggccgccaccaaccgtcccaactctatcgaccctgctcttcgtcgtttcggtcgtttc
gaccgtgaagtcgacatcggtattcccgacccaaccggccgtctcgagatcatgcagatc
cacaccaagaacatgaagctcgccgacgatgtcgacctgcagaccattgccgccgagacc
cacggttatgtcggttcggatttggcgtcgctgtgctctgaggctgccatgcagcagatt
cgtgagaagatggatttgatcgatcttgatgaggacaccatcgatgccgaagtgctcgac
tcgctcggtgttaccatggagaacttccgcttcgctctcggcgtatccaacccatcagct
cttcgtgaggttgccgttgttgaggtgcccaacgttcgatgggaggacattggtggtttg
gaggacgtcaagcgcgaactcatcgagtccgtgcaatatcctgttgaccacccagacaag
ttcctcaagttcggcatgtccccatcacgaggtgtgctcttctacggtcctcctggtacc
ggtaagacgcttttggccaaggctgtcgccaacgagtgtgcggccaacttcatctccatc
aagggacccgaactgctctccatgtggttcggtgagtctgagagcaacatccgtgacatc
ttcgacaaggctcgtgctgccgcaccttgcgttgtcttcctcgatgagttggactctatt
gccaagtcgcgtggtggatctcaaggcgatgctggcggtgcttcggaccgtgttgtcaac
cagcttctgactgagatggacggtatgacatcaaagaagaacgtcttcgttattggtgct
accaaccgaccggagcagctcgataacgcgctgtgccgtcctggtcgtctggacacgctt
gtctacgttcctctgcctgatctggcgtcacgtgtcagcatcatcaaggctcagctccgc
aagacacctgtggctgatgacgttgacattgacttcattgcgcagaacacacacggattc
tctggtgccgatcttggtttcgtcacccagcgtgccgtcaagctggcaatcaagcagtca
attgcgattgacattgagcgtcgcaaggctcgtgaggctgctggcgaggatgtcgacatg
gaggttgacgaagaggacccagtacctgtgctgaccaaggcgcactttgaggaggctatg
cgctctgcccgtcgttcggtgaccgatgtcgagatccgccggtacgaggcgtttgcgcaa
tcaatgaagaactctggcggctcgagcttcttccgcttccctgatgcggagaatgccgcg
gctggtggtgaccagaacacatttggtgctggtggcgaggatgaggacctgtacaactaa
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integrated database retrieval system
