Bipolaris oryzae: COCMIDRAFT_83531
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Entry
COCMIDRAFT_83531 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
bor
Bipolaris oryzae
Pathway
bor03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCMIDRAFT_83531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_83531
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_83531
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCMIDRAFT_83531
Coactivators
SAGA/TFTC/STAGA complex
COCMIDRAFT_83531
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
COCMIDRAFT_83531
STAGA complex
COCMIDRAFT_83531
TFTC complex
COCMIDRAFT_83531
SAGA complex
COCMIDRAFT_83531
SLIK complex
COCMIDRAFT_83531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
DUF2390
Motif
Other DBs
NCBI-GeneID:
19126278
NCBI-ProteinID:
XP_007683706
JGI:
Cocmi1_83531
UniProt:
W6ZQU6
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MSESQPQQQQQPNSGQQQQLLRPDDILKLQCLPEDEKQKYRLIMQNFWNICNTHQQGSQE
NTNARQKLTEWSQKFITRERQYRAKMKAQQQQQQQQGNQNQGQASQSNAAGQQNQNPVKQ
EGGQARAENTAGAVGQQQSNQGQNQGRGQVDPAIVKHVHEFPMQGPLTGPSPGTPEYEVK
LKEYRTGYLNMLAKQASLNESRKKLMQQLSERQSNGQDLPQDLLVLKGKIEKEHTNMRAQ
IDKFRALQKQWKEEREQNSQGQAQAQTQGQNSAQSPPPSQQQQQSSQQQSQPQQLQRQPS
QPNISAQPQVKEEPQIKVEGGQPQQPQPQPQQQTQQQPQPQQPQPQQQYNVQGNQGNQQQ
QPPQQQQQLNQQMPPSLPQQQQQQQPRPPVPHSQTMPPNQMPQFAQQQQQNFHQQQRPQI
NPMQANAHQQSNSPHPQSATGTGPPVPLSHQAAVSAANRSYTDPQRTNTPMQQGGQGGNF
GSREREQLNNPKMPIPRHLNVTSPQAVHMGQSRPTMSGPTNGAPGPMGQPVIPRPPPFQL
EGDGDRVLSKRKLDELVRQVTGGSEEALTPEVEEAVLQLADDFVDNVISNACKLSKLRDS
PQLDIRDIQVILERNYNIRIPGYASDEVRTVRKIVPAQGWAAKMNAVNAAKVMGGKTDF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatcgcagccccagcagcagcagcagcccaacagcggccagcagcaacagctg
ctacgccctgacgatatactcaagcttcaatgtcttcctgaggacgagaagcaaaagtat
cgcctgatcatgcagaatttctggaacatctgcaacacccaccagcaggggagccaggaa
aataccaatgctcgccagaagttgacagaatggtcacagaagttcattacacgcgagcgc
caatacagagccaagatgaaggcacagcaacagcaacagcaacaacagggaaaccagaac
cagggacaagcaagccagtctaatgccgctggccagcagaaccagaaccccgtcaagcaa
gaaggcggccaggctcgtgctgaaaacaccgcgggggcagtcggccaacagcaatccaac
caaggccaaaaccaaggtcgtggccaggtggatcctgctatagtaaagcacgtccacgaa
ttccccatgcaggggccgttgaccggaccttcgccgggcacgcccgagtacgaggttaag
ctgaaagaataccggacgggttacttgaacatgctagcgaagcaggcttctttgaacgag
agtagaaagaaactcatgcaacaactgagcgaacgacaaagcaacggacaagatttgcca
caagatctactcgtgttgaagggcaagatcgagaaggagcataccaatatgagggcacaa
attgacaaatttcgagctttgcagaagcaatggaaggaagagcgcgaacagaactcgcag
ggccaggcacaggcgcagactcaaggccagaactcagcacaatcaccgccgccatcgcaa
cagcagcagcagtcgtcgcaacaacaatctcaaccccagcagcttcaaagacagccatca
cagcctaatatctctgcgcaacctcaggtaaaagaggagcctcagatcaaggttgagggt
ggacagccacagcagccgcaaccgcaaccgcagcagcaaacgcagcaacagccacaacct
cagcagccccagccccaacaacaatacaacgtccaaggaaaccaagggaatcaacaacaa
caaccgccgcaacagcagcagcaactcaaccagcaaatgccaccttcacttcctcaacaa
cagcaacaacagcagcctcggccaccggtgcctcactcgcaaacaatgccgccgaatcag
atgccgcaattcgcgcaacagcagcaacaaaactttcaccagcagcagcgaccacagatt
aaccctatgcaagccaacgctcaccagcagagcaattcaccacatccgcagtctgcaacc
ggaaccggtccgccagttccactctctcaccaggctgccgttagtgctgcgaaccgatcc
tataccgatccccagcgcacaaacacacccatgcagcaaggcggacaaggtggtaacttt
ggcagtcgcgagcgtgagcaactgaacaaccccaagatgccgattcctcgacatctgaac
gtaacctcaccacaagctgtccacatgggtcaatcgcggccaactatgagtggccctacc
aacggcgccccagggccaatgggtcagcccgtcatcccgcgaccaccgcccttccagctc
gaaggcgacggcgaccgcgtcctcagcaagcgcaagctagacgagcttgtccgccaagtc
acgggtggctcagaagaagccctcacaccagaagtcgaagaggccgttctccagctcgca
gacgatttcgttgacaatgtgataagcaacgcctgcaagctctctaaactccgcgattct
ccccagctagacattcgcgatatccaggtcattctcgagcgcaactataatatccgcatc
ccgggctatgcgtccgatgaggttagaactgtgcgcaagattgtgcctgcgcagggctgg
gcggccaagatgaatgcggttaacgcagcgaaggttatgggtgggaagacggatttttag
DBGET
integrated database retrieval system
