KEGG   Bipolaris oryzae: COCMIDRAFT_84159
Entry
COCMIDRAFT_84159  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
bor  Bipolaris oryzae
Pathway
bor03030  DNA replication
bor03410  Base excision repair
bor03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    COCMIDRAFT_84159
   03410 Base excision repair
    COCMIDRAFT_84159
   03450 Non-homologous end-joining
    COCMIDRAFT_84159
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bor03032]
    COCMIDRAFT_84159
   03400 DNA repair and recombination proteins [BR:bor03400]
    COCMIDRAFT_84159
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bor04147]
    COCMIDRAFT_84159
DNA replication proteins [BR:bor03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    COCMIDRAFT_84159
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     COCMIDRAFT_84159
DNA repair and recombination proteins [BR:bor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     COCMIDRAFT_84159
Exosome [BR:bor04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   COCMIDRAFT_84159
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 19126405
NCBI-ProteinID: XP_007683884
JGI: Cocmi1_84159
UniProt: W6ZHZ2
LinkDB
Position
Unknown
AA seq 395 aa
MGIKHLYQLIDEHTPEAVKKGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNETGET
TSHLMGLFYRTMRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKTEAQAAAEEAKETGTA
EDVEKFSRRTVRVTKEHNAECQRLLKLMGIPYIIAPTEAEAQCATLAKGGKVYAAASEDM
DTLTFASPILLRHLTFSEQRKEPILEIHLDKVLEGLEMDQKQFIDLCILLGCDYLDPIKG
IGPSTALKLIREHKDLEGVVEHIKSQSSKKLTIPDDWPFADARLLFLEPDVLPADAPECD
FKWEAPDVEGLVKFLVEEKHFNEDRVRNGAAKLQKNMKTAQQSRLEGFFKPIEKTAEEKA
TLKRKADEKLELKKKKQKETAKAKKEAKAKPRTAG
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgggtattaagcacctctaccagctcatcgatgagcatacgccagaggcagtcaagaaa
ggcgagatcaaaaaccagtttggtcgcaaggtcgccatagatgcatctatgagcatctac
agttttctcatcgcagtccgctccgatggccagcaactcatgaacgaaacgggcgagacc
acatcacatctcatgggtctattttatcgcacaatgcgcatggtcgacaacggcatcaaa
cccctttacgtatttgacggtgctccacccaagctcaaatccggcgagcttgcaaagcga
tttcaacgcaagactgaagcacaggctgcagcagaggaagcaaaggagacgggtacggct
gaggatgtcgagaagttttcgcggcgaacagtcagggtgacaaaagaacacaacgctgag
tgtcaacggctgctcaagctcatgggcatcccgtacattattgcgccaaccgaggccgag
gcccaatgtgctacgctggcgaagggaggaaaggtgtatgctgctgcatcagaggatatg
gataccttgactttcgcatcaccaattctgctacgacacttgacctttagcgagcagcgc
aaggagcctattctagaaatccatctagacaaggtgcttgagggtctggaaatggaccag
aagcagtttatcgatctatgtatcctcctcggatgcgattacctcgaccccatcaagggc
atcggtcccagcactgctctcaagctcatccgtgagcataaggatctcgagggtgtagtc
gagcacatcaaatcacagtcttctaagaaactcaccattcccgacgactggccgtttgcc
gatgcgcgacttctcttcctcgaacccgacgtactccccgccgacgctccagaatgtgac
ttcaagtgggaagcaccagatgtggaggggttggtcaagtttttggtagaagagaaacat
ttcaacgaggacagagtacgaaatggagcggccaagctgcaaaagaatatgaagacggcg
cagcagagcaggttggagggtttcttcaagccgattgagaagactgccgaggagaaggct
acgttgaagcgtaaagccgatgagaagctcgagctcaagaagaagaagcaaaaggagact
gcaaaggcgaagaaggaggccaaggccaaaccgaggactgctggttaa

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