Bipolaris oryzae: COCMIDRAFT_84894
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Entry
COCMIDRAFT_84894 CDS
T03125
Name
(RefSeq) glycoside hydrolase family 28 protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bor
Bipolaris oryzae
Pathway
bor00040
Pentose and glucuronate interconversions
bor01100
Metabolic pathways
Module
bor_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
COCMIDRAFT_84894
Enzymes [BR:
bor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
COCMIDRAFT_84894
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Big_11
Motif
Other DBs
NCBI-GeneID:
19126561
NCBI-ProteinID:
XP_007684107
JGI:
Cocmi1_84894
UniProt:
W6ZHG2
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MVAYALTSMLLSAGALVSAAPSGLDARAGCTFTDAATAIKNKASCTNIVISGMTVPAGTT
LDLTGLKSGTTVTFQGTTTFGYKEWEGPLISVSGTNIKVVGAAGHTIDAAGQKWWDGKGS
NGGKTKPKFFYAHSLTTSSISGLNIKNTPVQAFSINGATDLTLDRISIDNTAGDSAGGHN
TDAFDIGSSSGITISNANVKNQDDCVAINSGSNIHVTNCQCSGGHGVSIGSVGGRKDNTV
KGVTVSGTTIANSDNGVRIKTISGATGSVSDITYENITLRNIAKYGIVIEQDYLNGGPTG
KPTTGVPITGVTLKNVAGTVTGSGTEIYVLCGKGSCSGWNWSGVSVTGGKKSSSCLNVPA
GASC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcatatgctcttacttcgatgcttctgagcgctggtgcgctcgtctctgccgcg
ccatcaggtcttgatgcccgcgctggatgcactttcaccgatgctgcaacggctatcaag
aacaaggcctcttgcaccaacattgtcatcagcggcatgactgttcctgctggtaccacc
ctggacctcacgggcttgaagtccggtactactgtcaccttccagggcacaactaccttt
ggatacaaggagtgggaaggcccgctcatctccgtctccggaactaacatcaaggtggtg
ggtgccgccggccacaccattgatgccgctggtcagaagtggtgggacggaaagggatcc
aacggaggcaagactaagcccaaattcttctacgctcactccctcaccacatcctcaatc
agcggactcaacatcaagaacacccccgtccaggccttctccatcaacggtgccaccgac
ttgactcttgaccgcatctctatcgacaacaccgcaggcgactcagccggcggccacaac
accgacgccttcgacatcggcagctccagcggcatcaccatctccaacgccaacgtcaag
aaccaagacgactgtgtcgccattaactccggcagcaacatccacgtcacaaactgccag
tgctctggcggccacggcgtctccatcggctctgtcggcggccgcaaagacaacaccgtc
aagggcgtcaccgtcagcggcaccaccatcgccaactcggacaacggcgtccgcatcaag
accatctctggcgccaccggctccgtttccgacatcacctacgaaaacatcaccctcaga
aacattgccaagtacggcatcgttatcgagcaggactaccttaacggcggcccaactgga
aagcccaccactggcgtccccatcaccggtgttacgcttaagaacgttgccggtaccgtt
accggatccggtactgagatctacgtcctttgcggaaagggaagctgctctggctggaac
tggtccggcgttagcgttactggtggaaagaagagctccagctgccttaacgttcctgct
ggcgcttcttgctaa
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