Bipolaris oryzae: COCMIDRAFT_85045
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Entry
COCMIDRAFT_85045 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K15174
RNA polymerase II-associated factor 1
Organism
bor
Bipolaris oryzae
Pathway
bor04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
COCMIDRAFT_85045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_85045
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
COCMIDRAFT_85045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
19126589
NCBI-ProteinID:
XP_007684242
JGI:
Cocmi1_85045
UniProt:
W6ZGX6
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MSSGRPVVHQDYIAKIRYSNALPPPPCPPKLLDIPNTGLSSGQYTSAGFASRLAREQSLN
IEADAELGMPIDLVGIPKVFDGDESAIQAMPRPPPLSAADKALMRPPNALGKSTSHVSSA
TFLRRTEYVTASTTGGSKFESSNSSNTMRLRRKRKQVETSLDDPTNISRHILKGFNIAYP
ADAYNGQDSAENIRAAESTPEERLAWNKPKHPRNPNLKLLDSYPLLPDWDATPDTGGYMV
FKFTAPPINNPLDPSYDPRLDVALLRPAGQTIEDQERYMEDLQAHKLDPTVPPPIARYQF
EFFLPSDKSKVRGIKRNFTTHDPTNEADIDFDIAEDDEGQPRKCFKYDNIRTYETSQQVG
DPSDTYGDVVALALHDPEKHESEPLRDTKLQKAAYFYPITQRTSLRPRRPGRVDMTEEQP
KVDIIEAAGKDPESFERREMYRKRAEGMEVGE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagctccggacgtccggtcgtccaccaggactacattgcgaaaataagatattcgaat
gcgctgcctcctccaccatgccctcccaagctgctagacattcccaacaccggcctatcg
agcgggcagtacacgtcggcgggctttgcatctaggcttgcgcgagaacaatcgctgaac
attgaagctgatgctgagttgggtatgcccatcgatctggtcggtattcccaaagtattc
gatggagatgagtctgctattcaggctatgcctcgcccaccgccgcttagtgctgcagat
aaggcgctgatgcgaccgccaaatgcgcttggaaagagtaccagccacgtctcgagcgct
accttcttgcggcgaacggaatacgttaccgcaagtaccactggcggttctaagttcgaa
tcgagcaactcatccaacactatgcgcctgcgtaggaagcggaagcaagtggagacgtcc
ctcgatgatcctacaaacatctcgcgacacattctgaagggcttcaacattgcctaccca
gcagatgcatacaacgggcaggacagtgcagagaacattagggcggcagagtcgacacct
gaagagcgactggcgtggaataagcccaaacaccccagaaaccccaatctcaagctgctc
gactcgtacccgcttcttccagactgggacgctacgcccgatactggtggatacatggtc
ttcaaattcaccgcaccacccatcaacaacccactcgacccctcgtacgacccacgactt
gacgtcgctcttctccgtcccgctggtcagaccatcgaagaccaagagcgctacatggaa
gacctccaagcacacaagctcgacccaacagtcccaccacctattgcacgctaccaattc
gagttcttcctaccctcagacaagagcaaagtccgcggtatcaaacgcaacttcaccaca
cacgaccctaccaacgaagccgacattgacttcgacattgccgaagacgacgaaggccaa
ccccgcaaatgcttcaaatacgataacatccgcacctacgagacatcgcaacaagtcggc
gaccctagcgatacctatggcgatgtcgtcgcccttgccctacacgaccccgagaaacac
gagtctgaacccctgcgcgataccaagttgcaaaaggcagcgtacttttaccccattact
caacggacgagcttgaggccgagacgaccgggtcgtgtggatatgacggaggagcagccc
aaggtggatattattgaggctgcgggtaaagatccagagtcgtttgagaggagagaaatg
tacaggaagagggcggagggtatggaggttggggagtga
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