Bipolaris oryzae: COCMIDRAFT_8672
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Entry
COCMIDRAFT_8672 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14289
exportin-5
Organism
bor
Bipolaris oryzae
Pathway
bor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCMIDRAFT_8672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bor03016
]
COCMIDRAFT_8672
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_8672
Transfer RNA biogenesis [BR:
bor03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
COCMIDRAFT_8672
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
COCMIDRAFT_8672
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
IFRD
MOR2-PAG1_N
vRNAP_dom
Motif
Other DBs
NCBI-GeneID:
19126916
NCBI-ProteinID:
XP_007691836
JGI:
Cocmi1_8672
UniProt:
W6YQB0
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MNAGVDDQAPQTSLANGGSGAHHHDNAHSDLSQVLEALQAIYAPTSSNETRRQATEYLEQ
AKRHPEAPSHGHTLALDRSQPAQLRYYGLTMLEHSIKYGWEDYTVDQGTALRGYAIELAQ
NVTETDPVYIRNKIAQLWTEIAKRSWGAEWLDMDEQLLALWTNSLHHQAIVLYVLETLSE
EVFNREDATAGLRGTDLGRACVEIFTPQIVIQEQLPTREKGPDLRCGDEGWLTRLCKNLD
WCLGQDYQNQENVKASAVKSMHALRAAMPWVMPKAIAATQVIEAVCKALATPAVEIQIAA
VETLQAIYNRTHLHDDEFVELVCPMFTPGSVSLLREVYNWTLVDMDVNDIDDQKYMLCKR
LSELANNLGLFIEQKPQSIPENSDLAGVFGFLYDIMRNPSLVVSIPVLHCWTKLLRSSVV
RESDVVNFMVGGLLETCCARLIRYEALPEDAEDVTLQFLNEDIDTVPERHAFLGNYRRFC
ADVIEVLVRKTPIEAMEHILAQATSMLQNLYRDRPPFQPQTFSKNSPQVLQVDAQVTVIE
AALKGYMKWQQSQGDDAQADERTRSVLEDSLEQWGRQILQAQFDDPEVARKIISLMATLA
TKSLGDRPGFALTFLEYMLTIRLADDTSYAQYSEAVKDLERICSLEMQKLAMKFADDFMN
VYEQLEAKINEMINDPTTDERQRMAYSAFLFIIIHRCTTLDHTIQTERMRQMLNRVKEAW
QNDEFTQAISSFQSFCEVLGMGQLPEFLSANNFRGVQDWSEQQLPSDGQALQASILERSQ
QLPLRLTKTLLAASTEKLRDGTAAYETAAALWAETIPVLLPNLLQLVSHAQAFNDIDSNW
SHLPIELQQVIRRVLTDRFWQAGISTESRDDFFAKVSGSKSTYEGFASTVRGTVRQIRES
SYYILYSLTRFRDFFYGIQDLPGPLSQALFGHAGALTAHHLSVLLTVSTHLIEGCPSQLR
SQFLPPMIQGLFRELDRKISGEWSEIARQVAESGDNDNLTDEMKTESILRQLTYSSVSLV
AVLLDSRQEFARQDDQSRKEANAPPMCDFILTTPSVLEPILLFCNSTIRVRDTRSVITIV
RVMRTLLPRFKEKSPIRDYFCNDILKSAITSLHEPYFVDCQKELASLIAGIIHLDDEIPR
SIILSLPGMGDEARVDRRLAKLQSANRQDERMQRSIVLDLLSSIKGVSIHEQGKIQRPKA
KTRTAMMEQYMTVDQQPAIVRGTSPGLAGVADMFGGQ
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctggggtcgacgaccaagccccgcaaacaagtctagcaaatggcggcagcgga
gcgcatcaccatgacaatgcccattcagacctttcgcaggttctagaggcgctgcaggcc
atatatgccccgacctcgagcaacgagacccgcagacaggccacggaatacctcgagcaa
gcaaagcgtcaccccgaagccccgtcacacggccacacactcgccctcgaccgctcgcag
cctgcgcaactgcgctactatggcctcaccatgctcgagcactccatcaagtatggctgg
gaggactacaccgtggaccaaggcaccgcgctgagaggttatgccatcgagctcgcacag
aacgttacggagaccgaccctgtctatattcggaacaagattgcccaattatggacagag
attgccaaacgcagctggggcgcagagtggttagacatggatgagcaattattggccctc
tggacaaactcattacaccaccaggccatagtactttatgtcctcgaaaccctctccgaa
gaggtctttaatcgcgaagatgctaccgctggcctacggggcaccgacctggggcgggcc
tgtgtcgagatcttcacgcctcagattgttatacaagagcagcttcctactagggaaaaa
ggtcctgatttgcggtgcggagacgaaggttggttgacgaggttatgcaaaaacctagat
tggtgcttgggacaggactaccagaaccaggaaaacgtcaaagccagtgctgtcaaatcc
atgcatgcgctcagagccgccatgccatgggtcatgcccaaagccattgcggccactcag
gtcattgaggctgtctgcaaggccctagccacaccagcagtcgagatacagattgctgca
gtcgaaaccttacaagctatatacaaccgaacgcacctacacgacgacgagtttgtggag
ctagtatgccccatgtttacaccgggcagcgtctcgctccttcgggaagtatacaattgg
acactcgtggacatggacgtcaatgacatcgatgaccagaaatatatgctttgcaaaagg
ctgtccgagttggcaaacaaccttggtctgttcattgaacaaaagccccagtctattccg
gaaaacagcgatctcgccggtgtatttggttttctgtacgacattatgcgcaacccaagt
cttgtcgtttccatacccgtccttcactgttggactaagctgctgcgatcaagcgttgtt
cgcgagtctgacgtcgtaaacttcatggttggaggtctgctcgagacatgctgtgcgcga
ctgatccgctacgaggcccttcctgaagatgccgaagacgtgacgttgcaatttttgaat
gaagacattgacactgttcccgaacgacatgccttcctaggcaactataggagattctgc
gccgatgtaatcgaggtactcgtgcgcaagacgccgattgaggccatggagcatatcctc
gctcaagcaaccagcatgctgcaaaacttgtaccgcgaccgccccccgttccaaccacag
acatttagcaaaaactcgccccaagttcttcaggtagacgcccaagtcaccgtcattgag
gctgctctcaaaggctacatgaagtggcagcaaagtcaaggcgatgatgcccaagccgat
gagcgaacgcgaagtgttctagaggactcactagagcaatggggccgccagattctacaa
gcacaattcgatgatcctgaagttgcaagaaagatcatatccctcatggccacccttgcc
accaagtcacttggcgaccggcctggctttgcgctaactttccttgaatacatgcttacc
atacgtctagcggatgacaccagctacgcgcagtactcggaagcagtaaaggacctagag
cgcatatgcagcttggagatgcagaaactagccatgaagttcgccgatgattttatgaac
gtctacgagcaattagaagcaaagatcaatgagatgatcaatgaccccacgactgacgaa
cgccaacgaatggcgtactctgctttccttttcatcatcatacacaggtgtacaacgtta
gaccacaccatccaaacagagcgcatgagacagatgctgaaccgcgtcaaggaggcttgg
cagaatgatgagttcactcaagccatctcttcattccaatctttctgcgaagtcctgggt
atgggtcagttacctgaattcctgtctgccaacaattttcgcggcgtgcaggactggtct
gaacaacagttacctagtgatggtcaagcactgcaggcttcaatccttgagcgatctcaa
cagctgccgctacgactgaccaagacgctacttgcagcatcgactgagaagttgcgagac
ggtactgctgcatatgagactgctgcagcactgtgggcagagacgatacccgtgctactt
cccaatcttctccagctcgtgagccatgcgcaagcatttaacgacattgacagtaactgg
tcacacctgccgattgaactgcagcaggtcattcggcgtgtcctgactgatcggttctgg
caagcgggtatctcgacggaaagcagagatgacttcttcgccaaggtcagcggctccaag
tccacctacgaaggttttgcgtcgaccgttcgaggcactgtccgacaaatcagggagagc
tcttactacatactctactcgttgacaagatttcgagacttcttctacggtatacaagac
ttaccgggaccgctgagccaagctctttttgggcacgctggtgccttgaccgcacatcac
ttgtctgttctgcttaccgtatctacgcatctgatcgaggggtgtccgtcacagttacgg
tcacagtttttaccgcccatgatccaagggctattcagggaattggacaggaagatctct
ggggaatggagcgagattgctcgccaagtggctgaatcaggggataatgacaacttgaca
gatgagatgaagaccgaaagtatccttcgtcagcttacatactcttcggtctcacttgtc
gctgtcctgcttgattcgcggcaggagtttgctcggcaagatgaccaaagtcgcaaggaa
gctaatgcgccacccatgtgcgatttcattctcactacaccctcagtcttggagccgatt
ctcctcttctgcaactctaccatccgtgtaagagacactcgatctgtcatcactattgtg
cgtgtcatgcggacgcttcttccacgcttcaaggaaaaatctccgatccgcgattatttc
tgcaacgacattctcaaatctgccatcacatcgctacatgaaccgtactttgttgattgt
cagaaggagcttgcgtctctgattgcaggtatcatccatctagacgatgagattccacgc
tccatcatcctctcattacctggcatgggtgacgaagctcgtgtcgaccgccggctcgca
aaacttcaaagtgcaaaccgtcaggatgagaggatgcagaggagcatcgtcctggatctg
ctcagtagtatcaagggcgtaagtattcatgagcaaggtaaaatccagcgaccaaaggca
aagactaggacggcgatgatggaacaatacatgactgttgatcaacagccagctattgtt
cgcggaacgagcccgggtcttgcaggcgttgccgatatgtttggggggcagtaa
DBGET
integrated database retrieval system
