Bipolaris oryzae: COCMIDRAFT_8682 Help Entry COCMIDRAFT_8682   CDS       T03125                                  Name (RefSeq) hypothetical protein   KO K18715   nucleoporin NUP159 Organism bor  Bipolaris oryzae Brite KEGG Orthology (KO) [BR:bor00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bor03019]     COCMIDRAFT_8682 Messenger RNA biogenesis [BR:bor03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      COCMIDRAFT_8682 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_NUP159_NUP214 WD40 Beta-prop_THOC3 ARM_TT21_4th WD40_WDHD1_1st Beta-prop_Vps41 WD40_CDC20-Fz Beta-prop_WDR5 Motif Other DBs NCBI-GeneID:  19126941 NCBI-ProteinID:  XP_007691841 JGI:  Cocmi1_8682 UniProt:  W6Z1V5 LinkDB All DBs Position Unknown AA seq 1478 aa AA seqDB search MSKSHAPAVEVGAEVPEIETEHLGFKVLSNGKQGPKKVKLLPQPWPTDDLPSASASLLSV ASKPGLLAAAGPNVLVIASTDAVRKAFEGKTIADEIDKPDDPRLEERDIDVVSDFTPDVT ISTENLRHVAFSADGDFLVVAPEQQASISIFSVAEVVKGRKDAEQTVQTDAPVRALLPNP APEFEHFFAIVLDSGKLQICNVTDGAKKTIRDAHVNCAAWSTRGKAVVSGSTDGTCAINM TNGELKGVIPRAPDVDESYEVTGVTWLNTEEFLAVYSVRDQDPENPEPKKFSVIKSAKGW GSFTYHAFAWDPLPEAFEPPQRPLPTRFSSTRLRNWKPDLEDMLIITSSHADSIAILAST SNKISPDQQNLKELMLVNVDDTKKASVPRTAYGEDELDSVFIGEALDLSSKEKILRPIPS LEEINEAPWPLPAYMALTHEGLLTAWWVVWNRSIEAGERYPGLIFKSESTQREPTTTPRA HTPASKLPVATSTPFGQPSTPSHTPFGKSANTPGTPGIPHFGNAGHNSPSPALMRPTPPG FGTPGFGASTSSIPTPTLSKPPQPAFGAPTAVGGAGKAAFGAPSAIGAAGGSGFGAAGSM GNKSSLWGTPTPSSEAKANPFSGGGGNSFGFAKFGQNGGASSFSSFGSAGSAQASSGFAS LGQSQQKSGFANLKSEPSFGSTVTVSSGTGSSLPSWGNTPAQQSSSIFGQPSKSSFNTAS FESKASDMSDANDTQGRKRDEATPTPQAPASQGGLFGLAGGFKLGTTFKSDGTATDDPAK LAAPANGSFFGSDFADTLGKTELKPPATPASEPPQYVSTTPASPPKQKLFPSDTPAKDSA TPKAAPPVQEPATPFDDAPLPPDFTKSKPSKVDDAPLPPDFINTKPSQSNGDDLPPLAGS PGVEVEAPSSSVEASPIGNGENHSDYSEDDQDDDDEEPDDTYPPNNASKSYQPKIGTQSS YFPPAPTPPVMKSGGTSQSGRSTSPTQNSLFGQPSKPNGSQPSFGGNSLFGQQSVKASFG SRPNSSSASAKPPYPPSATNRSQNLRSPSPMRPSSSSRFRREPLVAPGASLSSSLQGSKP PTPQPQVSDLEDEEDERMRAQLAQPIEPSRHLEEFVAYQNYTGGKSPNKSGHAAQIEMIY KDINGMVDALGWNMRSIKAFTLYHKQPQPNHQIDRGMLEDILSQGHDGSWFEKFTLCEIQ ALKSLEEDLEQELDAGRVQDVLDKLAQLARLLHEKAKLMTRLNDIRRQIINRKDPERIEA LRKAPLSKELADGQKSLRNDYAQLLTSLRKAEDAVAVLRSRLATHNAQAGSTKAVPSMEA VKKTILRLANLAEQKNNDILVLEAQMRKLGLAEPSRPSSSSSRTGTPRQSRRTSLRRSIA DTPYATPPTGHKKLTLTELNRRALTPEVDNTPTPGKGYGLFYTPEGSPAAGGKDIARLSD LVDENMDTLRETARSRKQVAKNLKGVLLERGIKVTRVN NT seq 4437 nt NT seq  +upstreamnt  +downstreamnt atgtcaaagagtcatgcgccggcggtagaggttggggctgaggtgcccgagattgagaca gagcatctaggcttcaaagtccttagcaacggaaagcaaggccccaagaaggtcaaactt cttccccaaccatggcctaccgatgatctcccttccgcttcggcgagtctcctctccgtc gcctccaagcctggccttctcgcagccgctggtcctaatgtcctcgtcatcgcatctacc gacgccgtgcgcaaggccttcgagggcaagacgatagccgacgaaattgacaagcccgac gatccacgactcgaagaacgcgacatcgatgtcgtgtcagacttcacgcctgatgtcacc atctctaccgagaacctgcgtcacgttgccttctctgccgatggagacttcctcgtcgtc gctcccgaacagcaagcctccatttctatattcagcgtcgctgaggttgttaaaggtagg aaagatgcggaacagactgtgcaaacagacgcgcccgtccgcgccctactccccaacccg gcccccgaattcgagcatttctttgctattgtcctggattctggcaagcttcagatatgc aatgtgacggatggtgccaaaaagacgatacgcgatgctcacgtcaactgcgctgcctgg agtacacgcggaaaggctgtcgtctctggttcaaccgatggtacctgcgccattaacatg accaatggagaactcaagggagtcattcctcgcgcaccagatgtcgatgagagctacgaa gtgactggagtgacatggctgaacacggaagagtttctagcggtctactcagtcagggac caagatccagagaacccagaacccaagaaattcagtgttatcaagtccgcgaaaggttgg ggatccttcacataccatgctttcgcttgggatcctcttcccgaggcgtttgagcccccg caacggccacttcctacccgcttctcatccacgcgactacgaaactggaagcctgatctc gaagatatgctgatcatcacctcctcgcacgccgattccatcgccatccttgcctctaca agcaacaagatctctcccgaccaacaaaaccttaaagagcttatgttggtcaatgttgac gacactaagaaggcatctgtgccacgtacagcatatggtgaagatgaattggacagtgtc tttattggtgaagctctggatctttcgagcaaggagaaaattttgcgtccaatccctagc ctggaagaaatcaacgaagctccttggccattgccggcttacatggctctgacccatgaa ggtcttctcacagcctggtgggtggtatggaaccgctcgattgaagctggcgaacgctat ccgggtctcatcttcaagagcgagtctacacaacgagagccaactaccacaccccgggct catacccctgcatccaaacttcctgttgctacttcgacaccatttggacagccttccacg ccttcacacactccttttggtaagtcagcaaacactcctggaacccctggaattccccac tttggcaatgctggacacaattccccatcccctgccctgatgaggcctacgccaccaggc ttcggcacacctgggtttggagcttcaacgtcaagcatccccacgcctacgttgagcaaa cctccacagcctgcgttcggtgcaccgactgcagtgggtggtgctggaaaggcagccttt ggtgcaccatctgcaattggtgcagctggcggctctggatttggtgcagcaggcagtatg ggcaacaagtcatctctatgggggacgcctaccccaagttccgaggccaaggccaaccct ttttctgggggtggaggaaactcatttggattcgccaaatttggacagaatggtggtgcg tcaagcttttccagctttggcagcgccgggtctgcccaagcaagttcaggatttgcatca ctcggacaaagccagcaaaaatccggttttgctaatctcaagagtgagccgagctttggt tcaacagtcactgtaagttccggaaccggatcgtcgctaccttcttggggcaacacaccc gcccaacagagcagctcgatcttcggacagccgagcaagtcttctttcaacacagcttcg tttgagtcaaaggcatctgacatgagtgacgcgaacgacacgcaagggcggaagagagat gaggctacaccgacaccccaggccccagcatcgcaaggcggtttgttcgggcttgctggt ggcttcaagctcggaacaacattcaagagcgacggcactgctaccgacgatccggcaaag ctagctgcgcctgcgaatggctctttctttgggagcgactttgctgacacgcttgggaaa acggaactcaaacctccggcaacacccgcgagcgagccaccacaatatgtctctaccaca ccagcatcgccaccaaagcagaagttgttccccagtgacactcctgccaaagacagcgca acccccaaagcagcacctcctgtacaggagccggctacccccttcgacgatgcccctctt ccaccagacttcaccaaatcaaagccatccaaggtcgatgacgcaccactccctcctgat ttcataaacaccaagccctcgcagtcaaatggtgatgatttgcccccgcttgcgggtagt ccaggtgtcgaagtggaagctcccagttcttcggtcgaggcgtccccaattggtaatgga gaaaaccacagtgattactctgaggacgaccaggacgatgatgatgaggagcctgatgat acctatccaccaaacaacgcctcaaaatcataccaaccaaagattggtactcaatcaagc tactttccccctgcgccaactcctcctgtcatgaagtctggaggtacctcgcaatccggt cgaagcacatcacctactcagaactccttattcggacagccctctaaacctaatgggagc cagccatcgtttggaggtaattcgttgtttggacaacaatctgtcaaagcttcctttggc agcaggcctaattcgtcatctgcatctgcgaagcctccttacccaccttccgccaccaat cgctctcaaaacctgcgttcacccagtccaatgcgccccagctcatcttctcgcttccga cgtgagcctctagtcgcacccggggcttcccttagctcttctctccaaggatccaaacct ccgacaccccagccgcaggtttccgatctggaagatgaggaggacgagagaatgcgcgcg cagcttgcgcagccgatcgagccaagccgtcatcttgaggaattcgtagcataccagaat tatacagggggcaagtcgcctaataagtctggccacgccgctcagattgagatgatatac aaggacatcaatggcatggtagacgctttgggctggaacatgaggtcgatcaaagccttt actctataccataagcaaccccagcctaaccaccaaatcgatcgaggcatgctggaagat attctgtcccaaggacatgatgggtcgtggttcgagaagttcaccctgtgcgagatacaa gcattgaagtctctcgaggaggacttggagcaagagcttgatgctggccgagtgcaggac gtactcgataaactagcacagcttgctcgcctcctccacgagaaggctaagctgatgact cgtctcaacgatattcgtcgccagattatcaaccgcaaggatcctgaaaggattgaggcg ctccgcaaagcacccttgtcgaaggagcttgcggatggacaaaagagtctgcgcaacgac tacgctcagctgctcacatcgctgcgcaaagctgaagatgctgttgctgtccttcgttct cgccttgctactcacaatgcccaggctggcagcaccaaggctgtaccctctatggaagct gtcaagaagacaatcttgagattagccaaccttgcggagcaaaagaacaacgacattctc gttcttgaggcgcaaatgcgtaagctgggtcttgccgaaccgagccgtccatcatcttcc tcttcacgtactggtacaccacgacaatctcgccggaccagtctgcgtcgcagtatcgcc gacacaccatatgctacacctcctacgggtcataaaaagctcaccctgactgagttgaac cgtcgcgctcttacccccgaggttgacaatacgccaactcccgggaaaggctacggcttg ttctacacacccgaaggtagccctgcagccggcggaaaagatattgctcgtttgtcggac ctcgtcgatgagaacatggatactttaagggagacggcaagaagcaggaaacaagttgcc aagaacctgaaaggtgttcttctagaacgaggaatcaaggtcacaagagtcaattga

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