Bipolaris oryzae: COCMIDRAFT_86919
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Entry
COCMIDRAFT_86919 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K12822
RNA-binding protein 25
Organism
bor
Bipolaris oryzae
Pathway
bor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCMIDRAFT_86919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bor03041
]
COCMIDRAFT_86919
Spliceosome [BR:
bor03041
]
Complex A
U1 snRNP components
U1 related factors
COCMIDRAFT_86919
Complex B
COCMIDRAFT_86919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
19126952
NCBI-ProteinID:
XP_007684866
JGI:
Cocmi1_86919
UniProt:
W6ZXM6
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
GPPGAAAPPGVAPPPGVANAQMPPAANGSRALPSGWQPPASMPNFNFNAPVIRLGTQGGR
PGAADSPVGGRRDNAAPPARRGLGMDRDGDRRDGPQPVNPPTREEIARTIFVGNIPDGVG
GDDGMERILETAGKLVRWTRATDANNKPQTFGFAEFADAQSLETAAEIFKDIRVPTKRQK
PGGAAKKEDGEEEEVETTKLHIMVDDASIKYAEEWSKTRNEDEATVQFRLDSAKEALSSV
LASFFNPPNAPNMDYAGDTVMQDAPTQDGEDVEVAFVNLATGEDELADIPAEMREVVAAE
IAAFRDRSNQRDRDRLRREEELEAEERRRSGRRATPPSSAPSGPGNANGVPLGPRAERGV
QGAPSGPKGSQFPRDYQAGVNFVNGGAVNNGVYISREDDDDSASDSELERRRQKKRNDEA
EEAYKKQLHRWLNTERRTVASLDRTNDYFKNMDAEREKARVAQAKQLREFDDDQEAASRR
DLYYRDHSDWIREREKVRGLEAKEDAIDRDQERREMAAQKRQQDHARGQADAFLEEQGEE
LMRREEQREPAHFKISLGAAAKKLEQTAAPRRTAADVENLLEDEDLTDQAGSKKRTLIPI
NFDAAVRANLTQEEIEEAQRQLARDIPNDKEGLWNWAVSWEHLPEKNINKDIKEWAANKV
LEIMGVQEEMLVDAIVEHLKSRGAPQPLVENLEVALDEEAEALVKKLWRMVIYYSETEKR
GIK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ggtcctccaggcgctgcagctccccctggtgtagcacctccgccaggtgtcgcaaacgct
cagatgcccccagcggcaaacggatctcgtgcccttccatccggctggcagccacccgca
agcatgccaaacttcaacttcaacgcgcccgtcatccgcctgggaacacaaggaggtcgt
cctggcgcggccgacagcccagtaggcggccgtagagataatgcagcaccacccgctcgt
cgtgggcttggtatggacagagatggcgatcgccgagatggacctcagcccgtcaatcca
cccactcgcgaggaaattgccaggaccatctttgttggcaacatcccagatggcgttgga
ggtgatgatggcatggagcgcattcttgagacggcgggaaaattggtccggtggacgagg
gcaaccgatgccaacaacaagccccagacattcggtttcgcagaatttgccgacgcgcag
agcttggaaacagcggcggagatcttcaaagatatccgtgtgcccacaaagcgccaaaag
cccggaggcgcggcaaagaaagaggacggtgaagaggaagaggtcgagactaccaagttg
cacatcatggttgacgatgcctcgatcaaatatgctgaagaatggagcaagactcgaaac
gaagatgaggctacagttcagttccgccttgatagcgcaaaggaagccctttcttcggtt
ctcgcaagctttttcaacccgcccaatgcgcccaacatggactacgcaggcgatacagtc
atgcaagacgcgccgacacaagatggcgaggatgtcgaggttgcgtttgttaacctcgct
actggagaggacgaacttgcagacatcccagccgaaatgcgcgaggtggtcgccgccgag
atagccgccttccgcgaccgttccaaccagcgcgaccgcgaccgtctacggagggaagag
gagctcgaggccgaagaacgtcgccgcagtggtcgccgcgcaacgccaccatcctctgct
cctagtggacctggaaatgctaacggtgtaccattgggtccaagggcagaacgaggtgtt
cagggtgcccccagtggacccaagggatcgcaattccctcgcgattatcaagctggtgtc
aactttgtgaatggcggtgccgtgaacaatggcgtctatatttcccgggaagatgacgat
gattccgccagcgactctgaacttgagcgccgtcgtcaaaagaagcgtaacgacgaagcc
gaagaagcgtacaagaagcagcttcatcgatggctcaacacagaacgccgtactgtggcc
tcgcttgaccgtaccaacgactacttcaagaatatggatgctgagcgtgagaaggctcgt
gtcgcacaggctaagcaactccgggagtttgatgacgaccaagaagcagcttccaggcgc
gatctatactatcgcgatcacagcgattggatccgtgaacgtgaaaaggttcgtggcctc
gaagctaaggaagacgccatcgatcgagaccaggagcgacgcgaaatggcggcccagaag
cgacagcaagaccacgctcgtggtcaagccgacgctttcctggaagagcagggcgaagaa
ctgatgcgcagggaggagcaacgcgagccagcacatttcaagatttctctcggtgcagcc
gccaagaagctcgaacagactgctgctccccgtcgcaccgcagccgacgtcgaaaacctt
ctcgaagacgaagatctcaccgaccaggccggttccaagaagcgaacacttatccccatc
aatttcgatgctgctgttcgtgccaatcttacccaagaagagattgaggaagctcagcga
cagcttgcgcgtgacattcccaacgataaggaaggcctgtggaactgggcagtctcttgg
gagcacttgcctgagaagaatatcaacaaggatatcaaagaatgggccgctaacaaggtt
cttgagattatgggtgttcaagaagaaatgctcgtcgatgctattgttgaacacttgaag
agcagaggcgcaccacagcctttggtagagaatttggaagttgcccttgatgaggaagca
gaagctctggtcaagaagctttggcgtatggtcatctactacagtgagactgaaaagagg
gggattaaatag
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integrated database retrieval system
