Bipolaris oryzae: COCMIDRAFT_87039
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Entry
COCMIDRAFT_87039 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
bor
Bipolaris oryzae
Pathway
bor04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
COCMIDRAFT_87039
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bor01002
]
COCMIDRAFT_87039
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bor04131
]
COCMIDRAFT_87039
04121 Ubiquitin system [BR:
bor04121
]
COCMIDRAFT_87039
Enzymes [BR:
bor01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
COCMIDRAFT_87039
Peptidases and inhibitors [BR:
bor01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
COCMIDRAFT_87039
Membrane trafficking [BR:
bor04131
]
Endosome - Lysosome transport
Others
Others
COCMIDRAFT_87039
Ubiquitin system [BR:
bor04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
COCMIDRAFT_87039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Rhodanese
USP8_dimer
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
19126972
NCBI-ProteinID:
XP_007684994
JGI:
Cocmi1_87039
UniProt:
W6ZXI1
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
MNGYPDGADASRNGHGQADSRGSGGYPPIAEIIASATDTADSLRIHSIRNLLERARTHFN
SAKTMLNNRIPAGAYWEYMVAYQIVVDLIPSHRDYYDKISNSRSQAHRDFNDLMRDIKSS
EERFMRIKDIIKNDNKRHGGHHRAASLPTGPSPHSRSGSVTPRRDDELMLPEVPTNLPNG
RASPAAPLDSSYRKPMVHPKPQTLHGRAIHQSAASVNSINDLAQRFANLRRSPIDTSARS
SPDLSVKMPSPADFTSTNRVMGPRGMPMAPTSMPQPPPKLPLDTQFATFLPKEPSPTYSP
ARNISGPSSINPPRSTPRSMNGTGGRNNSLAASSASSYAPNANGVPDSYFPSQQNPRTAP
ERTRSVSKPVELEIDASMLYDYYRMYNVLTIDVRNRTDYDAGHIYVRNIMCIEPLTLRDG
DSAEQLLDRLIISPDEEQTMFDRRNDFDVVVYYDESTKNIDFMQKPNRSEKETALKRLFD
TLHEFNAEKPLKRPPVLLKGGLDAWVDLVGPQALKMSTTAALVAAGPTRARAVRRSPAAT
HIAKNNQRRSRREYVPMDQEEEQAWLEEARKGRADVEVPPTEGEGEEDESNAPFYRSTEE
FLRRYPDVEAEQSMMYPPKPQFTNQYVAPAIPVAPSRPPPSVPRVGYSGVHERQDVQTTR
NNVYNSQPQFSNLRLHRTGLLNFGVTCYMNSVVQCLSGHLLLSDLFLTGRYQRDLQRDNW
KGTKGILPEAYATLLSNLYKGDVSSVRPSTFRRICGHFNSQWGIDEQQDAKEFLEFVLDY
MHEDMNLTWNKPPLKPLTDQEELTRERFPRQYSAMIEWRRYQHRDMSVIGGLFAGQHASQ
LTCQTCGVTSTTYEAFWSISVEIPREGQCDLRQCLESYCAPEHLAGDELWRCPRCKKDRE
AVKKITITRAPDTLVIHFKRFSASRTETARKVRTPVHFPLQRLDIGPFVEPPMTPEQEAF
VAQKARDGPAQLAGVKADPTMNGPYVYNAYAVIWHIGATLGSGHYIAFVKDKSRGCWRSF
NDDKIQDFDPGNLPANSRLQNEKAYIVFYERERVAGGAF
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaacggctatcccgacggcgcagatgcatcgaggaacggccatgggcaagccgactcg
cgcgggtctggtggctacccgcccattgcagagattattgcctctgctacagacacggcc
gattcgctcagaatccattcgatccgtaacttgctggaacgggcgcggacacacttcaac
tctgccaagacaatgctcaacaaccgcatccctgccggagcatactgggagtacatggtc
gcctatcaaattgtcgtcgacctaattccctcgcaccgtgactactatgacaagatcagt
aacagccggagccaggctcaccgcgacttcaacgaccttatgcgggacatcaagtcgagc
gaggagcgatttatgcgcatcaaggacattatcaagaatgacaacaagcgtcatggcggc
caccatagggctgcctccctacctacaggccccagcccacattcccgcagtggctctgtc
actccacgaagagacgacgaattgatgctgcccgaggtgcccacgaatctgccaaacggc
cgcgcttcgcctgctgcgcccttggattcctcttacagaaaacccatggtgcatccaaag
ccccaaacgctgcatggccgcgctatccatcaaagtgccgcatcggtgaatagcataaac
gacctcgctcagcggtttgccaacctacgacgctctccaattgatacatctgcacgctct
agccctgacttgtcagtcaaaatgccctctccagcagacttcacttctaccaacagagtc
atgggaccgcgcggtatgcccatggcaccgacgtccatgcctcaaccgccaccaaaactg
ccactagacacacaatttgctaccttcctacccaaagagcctagccccacctacagtccc
gcacgcaacatttcaggcccctcaagcatcaatccgccacgaagtaccccgaggagtatg
aacggcaccggaggccgtaacaactcgctggctgcatcaagcgcgtccagttatgccccc
aatgcgaatggtgtgccagactcatatttcccatcccaacagaacccacgtacggccccc
gagaggacccggtctgtcagcaaacctgtcgaactcgagatagatgctagcatgctatac
gactactaccgcatgtacaatgtactcaccattgatgtacgcaataggaccgattatgat
gcaggccacatctacgtgcgaaacatcatgtgtatagagcctttgacgttacgcgacggg
gactccgcagaacagctactagaccgccttatcatctcaccagacgaagagcagaccatg
ttcgatcggcggaacgactttgatgtcgtcgtctattatgacgaatcaaccaaaaatatt
gattttatgcaaaagcccaaccgttccgaaaaggaaaccgcattgaaacgtcttttcgac
accctacacgagttcaatgccgagaaaccactcaaacgcccgccggttctattgaaaggt
ggccttgatgcttgggttgacttggtgggcccacaggccttgaagatgtcgactactgct
gcactggtagctgcgggtcctaccagagctcgcgctgttcggcggtctcctgctgctact
catattgcaaagaacaaccagagacgatcgcgacgcgagtatgtacccatggaccaggaa
gaagagcaagcatggctagaagaagctcgcaaagggcgggctgatgttgaggtgcctcca
acagagggcgaaggagaagaagacgagtcaaatgcgcccttctatcgctctacagaggag
tttttgcgtcgatatcccgacgtcgaagctgagcagtcaatgatgtacccgccaaaaccc
caatttactaaccaatacgtcgcacctgccatacctgtcgccccatcacggccgccgccg
tcggtgcccagggttggttacagtggtgtgcatgaacgccaagatgtgcaaaccacccgc
aacaatgtctacaactcgcaacctcagtttagtaatctgagattgcaccgaactggattg
ctaaacttcggagttacatgctacatgaactcggtggttcagtgtttaagtggacatttg
ctcctctcagatttgttcctcactggacgataccagcgcgacctccaacgagacaactgg
aaaggtacaaaaggtatcctcccagaggcgtatgcgacgttgctatcgaacctctacaag
ggtgatgtgtcgtcggtacgccctagcactttcagacgcatttgtggtcacttcaactcg
caatggggtattgatgagcagcaagatgccaaggaatttctcgaattcgtgttggactac
atgcacgaagacatgaacctgacatggaacaagccgccccttaaaccgctgacagatcaa
gaagaattgactcgtgaacggtttccacggcaatactcggccatgatcgaatggcgacgg
taccagcaccgcgacatgtccgttatcggtggtctgttcgctgggcagcacgcttcacag
ctcacatgtcaaacgtgtggtgtaaccagtaccacgtatgaggcgttttggagcattagc
gtggaaattcctcgcgagggccagtgcgacctacgccaatgcttagagtcctattgcgcg
ccagagcatctagcaggagacgagctatggcgttgcccacgctgcaaaaaagaccgcgag
gcggttaagaagattaccatcactcgagcaccggacacacttgtcatccacttcaagcgg
tttagcgcatctcgtactgaaactgcacgcaaagtccgcacgcccgtccactttccactt
caaaggctggacataggcccgtttgttgagccaccaatgaccccggagcaagaggcattt
gttgcgcagaaagcccgggacggacccgcgcagttggctggagtcaaggccgaccccacg
atgaatggaccgtatgtctacaacgcatacgctgtcatctggcatattggtgcgactctt
ggcagtggccattacattgcttttgtcaaggacaagtcgcgaggatgttggcggtctttc
aacgatgacaaaatccaagattttgatccaggcaatcttccagccaacagtcgattgcag
aatgaaaaggcatacattgtgttttatgagcgggagagggtcgctggtggggcattttag
DBGET
integrated database retrieval system
