KEGG   Bipolaris oryzae: COCMIDRAFT_87420
Entry
COCMIDRAFT_87420  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
bor  Bipolaris oryzae
Pathway
bor03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    COCMIDRAFT_87420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bor03021]
    COCMIDRAFT_87420
   03036 Chromosome and associated proteins [BR:bor03036]
    COCMIDRAFT_87420
Transcription machinery [BR:bor03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     COCMIDRAFT_87420
   Coactivators
    SAGA/TFTC/STAGA complex
     COCMIDRAFT_87420
Chromosome and associated proteins [BR:bor03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     COCMIDRAFT_87420
    STAGA complex
     COCMIDRAFT_87420
    TFTC complex
     COCMIDRAFT_87420
    SAGA complex
     COCMIDRAFT_87420
    SLIK complex
     COCMIDRAFT_87420
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 TFIID_NTD2 WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP Beta-prop_Aladin Beta-prop_IFT140_1st WDR55 ASA1 DSE1_N Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_WDR41 LisH CFAP251_N NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_Nup120_160 PAC11 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Tricorn_2nd WD40_RFWD3 Beta-prop_SPT8 PROPPIN Tricorn_N Beta-prop_ELP1_1st Beta-prop_pof12 DUF2283
Other DBs
NCBI-GeneID: 19127055
NCBI-ProteinID: XP_007685069
JGI: Cocmi1_87420
UniProt: W6ZX63
LinkDB
Position
Unknown
AA seq 729 aa
MSGPPQGPGPVRAMSVGNGPPSAGLPPHAAMPPQGGPPPPGSSGPQSQQNLNQIVLEYLS
KKGYVRTEAMLRKESEPQTNGQPLTAQSTEAGGAKYTKAFELLRKYTEDNLDLYRPELRK
LLWPVFVYSFLDLVRDFYTKDAETFFAAYQGLFERDHDEDVKTLRQVRLQSHLQESRIAK
LYLDNKYRITLTTMPFFNLIQFLESKHFDGGSTIIDVIREHLNIVTVDRTATAEKSIAAI
LASGHGDDELPAEDEGIPGHAPGHPLTARHDPEADAARIRLQLGAYPQEAELQDDVRAAL
QEEDAKAAPRPGQPSLLDEFEQRIKREPTEDGPSREFVPLPPSLARDVSMEVQKIIEHRD
RYKMEGRTGGVGPAVSVTMYTFHNTYDSINCIDFSGDNKLVAAGMSESYIRVWSMDGSPL
TSPNDNPDMQPSSSRRLIGHSGPVYAVAFSPSTANPYPSGPPTNSECLLSCSEDKTVRLW
SLDTYTCLVAYRGHDNPIWDLQWGPYGHYFLTGSNDRTARLWSTDHIEPLRIYVGHDNDV
DCVTFHPNNLYVFTGSCDRTVRMWHIAGGNCLRLFTGHTGNVTAISCSPDGKTLASADDA
GNIILWTLETGRRRKRMRGHGKGGIWSLSWSVESSVLVSAGADKTVRVWDVLQETSDKAA
DGVAAKTDGAMTTKGASGTTVTGKKAAKETGVSADQISVFPTKDSPVYKVQFTRMNLVLA
GGAYLPTRS
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgtcagggcccccccaagggcccgggcctgtaagggctatgagtgtaggaaatgggcct
ccaagtgcaggtttaccaccacatgcagccatgccgccgcagggtggccctccaccgcca
ggctcgtcgggaccccagtcacagcagaatctcaatcaaatcgtattggagtatctctca
aagaagggctatgtccgcaccgaagcgatgcttcgcaaggagtctgaaccacaaaccaac
ggccagcctcttaccgctcagagtaccgaagccggcggcgcaaagtacacaaaagcattc
gagctgctgcgcaaatatacagaggataatctggatctgtatagaccagagctgcggaag
ctgttatggcccgtctttgtctattccttcttagatttggtacgcgacttttataccaaa
gatgcagagacattctttgccgcgtaccagggcttgtttgagcgcgaccacgatgaggat
gtcaaaacgctccgtcaagtacggttacagtctcatttgcaggagagcagaatagcaaaa
ctttacctcgacaacaagtaccgaataacgttgacgacaatgccgttcttcaacctcatc
caattccttgaatctaagcactttgatggcgggtctacaataatagatgttattcgcgaa
caccttaatattgtcacagttgacaggacagcgacggcagagaaaagcatagcggccatt
cttgctagcggacatggcgacgatgagctccctgcagaggacgaaggcatcccaggacac
gcccccggccaccctctcacagcgcgccatgaccctgaggcagatgctgcgcgaataaga
ctgcaactgggcgcgtacccccaggaggcggaactacaagatgatgtccgtgctgctcta
caagaggaagatgccaaagctgcgccaaggccaggccaaccaagtttgctggatgagttt
gagcaacgcatcaagcgggagccgacagaggatggaccctcgcgcgagttcgtccctttg
cctccatcacttgcccgcgatgtctccatggaggtacaaaagattattgaacaccgagac
cggtacaagatggagggaagaactggtggagtcggacctgctgttagtgttaccatgtac
actttccataacacatacgacagcattaactgcatagatttttctggggacaacaaactc
gttgctgccggcatgagcgagtcgtacatccgcgtctggtccatggacggtagccctctc
acttcaccaaacgataatccagacatgcagccatcatcttctaggcgattgatcggccac
tcaggtcccgtctacgcagttgccttttccccctctaccgccaacccgtatccttctggc
cctcccacaaactctgaatgtctcctctcatgctcagaagacaagacagtccgcctgtgg
tctttggatacgtacacctgccttgttgcgtaccgtggccacgataaccctatttgggat
ctccaatggggaccctatggccactacttcctcacaggctcaaacgaccgcactgcgcgt
ctgtggtcgaccgatcacattgaacctcttcggatctacgttggccatgacaacgacgtc
gactgcgtcactttccaccctaataacctctatgtcttcacaggctcatgcgaccgcaca
gtccgcatgtggcacatcgctggtggtaactgtttgcgcctctttaccggccacaccggc
aacgtcacagccatatcctgctcccccgacggaaagacgctcgcatcagcagatgacgcc
ggcaacatcatcctctggaccctcgaaacaggccgcaggcgcaagcgcatgcgtggccat
ggcaaaggcggtatctggtctctctcctggagtgtagagtcgagcgtccttgtctctgcc
ggcgccgacaagacagttcgtgtatgggacgtactacaggaaactagcgataaagctgcc
gacggtgtcgctgcgaagacagatggcgcgatgacgacgaaaggcgccagcggcacgacg
gttacgggaaagaaggcggctaaggagacaggtgtgtcggcggatcagatcagtgtgttt
cccacaaaggatagccctgtgtacaaggtccagtttactcggatgaatttggtccttgcg
ggtggtgcatatctgcctacgcgttcgtag

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