Bipolaris oryzae: COCMIDRAFT_8788
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Entry
COCMIDRAFT_8788 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_8788
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
COCMIDRAFT_8788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEN1_C
XPG_I
XPG_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
19127149
NCBI-ProteinID:
XP_007691959
JGI:
Cocmi1_8788
UniProt:
W6YVD9
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MGIHGIYKEIGPGTRIALSKLAVEKFEETGRPLRIAIDTSIWLFQIQASKGKTYQGGTNP
ALRTFYYRLLRLISLAIHPVFVFDGPNKPPFKRNKRTGPTVASIPEFLAKQLLKQFGYPI
HLAPGEAEAECALLQREGIVDAVLSEDVDTLMFGSGVTLRNWSPEKSGKTPTHVNVYDAV
ETKNGPSGLDREGMILVALMSGGDYVPEGIPGCGPKTACEAAKAGFGADLCKIPRNDSRA
IAQWKERLQHELKTNESKFFKRKHGALKIPDDFPRLDILGYYTHPAISNQAGLDKLRRSI
NWDRDLDFPGLREFTQDAFDWAKLEGAKHFIRSLAPSLVVRQLRIRAEQINRLPTDNLRA
IQEDESTLIKGLHGKRQHTVTDHCTELRVSFTPVELVKIDLSQEDPDDDVDAPPSSSQQD
IGDVDLDEDMPLDMEEEGPRKRGPTKFDPEKPARIWVMETFVKVGVPLKVQDWEAGRQAK
QKPRRAASVHDTDTAAQKAKTTTRRTKTTKDQPQVRIESFAKVTKPGVRASRALAKAQDK
AGELPAPSSQTTGKAEYETIDLSSSSPLKPRTLTPRSQPDPGKSLSPVLEDLPPSVSKRR
RRAPIQRSKTLPADTSDILDRPSTPPLLRTIETLDLAESPAHPSPLQLPAKKAKTRTLKE
VAATRTSRDSSVPKQTTLDAWRASATPTKQQGTTLLSGAALVPAPPQFAEPSEDVESLDL
TLSSPKRPKATRRSQKEATSEQNPMVSSTTRPPLTSISSNMSASSTSSVSILGKKKSIKD
VFRSNPPRSTSPRLSKTTSSRSSVDTLDLTSPRPAAAKSRSTSPQADVLDLTEQLSPAGG
CDPVPQPTTVTPVSPPTRSSRSPSEENSVSPPAAWKAQNKKKRAIILRKSVVGAWDYVDI
DSPEKPTGQTPGSLLKGKDRRKWRESAVEVLDLT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgggtatacatgggatctacaaggaaatcggccctggcacacgcatagcgctctccaag
ctcgccgtcgaaaaattcgaagagactgggcgcccgctgcgcatcgctattgatacatcg
atatggctttttcagatccaagctagcaaaggcaagacttatcagggcggcacgaatcct
gcgttgcgaacattctactaccgcctcctgcgcttgatttctcttgccatccaccctgtc
tttgtcttcgatggacccaataaaccgccattcaaacgcaacaagcgcaccggtccgact
gtcgcctccatccccgagttccttgcaaaacagctcttgaagcagtttggatatcccatc
catcttgcaccaggcgaggccgaagcagagtgtgcactgctgcaaagggaaggaattgtc
gacgcggttttgagtgaagatgtggacacgctcatgtttgggagcggcgtcaccctccga
aattggtctccggagaaatcaggaaagacaccaacccacgtcaacgtgtacgacgctgtc
gaaaccaaaaatgggccatcaggactggatcgcgagggcatgatcttggtcgcgctaatg
agtggaggagactatgtgccagaaggaatacctggatgcggccctaagactgcatgtgaa
gcagccaaggcaggttttggtgccgacctgtgcaagatcccacgaaacgactctagagcc
atagctcaatggaaggagcggctgcaacatgagttgaagacaaacgaaagcaagttcttc
aaacgcaaacacggcgcactcaagatcccggacgatttcccccgactcgatattctcgga
tactacacacatccggcgatctcgaaccaagcaggactagataagttgcgtcggtccatc
aactgggatcgggacctcgactttccgggtctgcgcgaatttacacaagatgcttttgac
tgggccaaactcgagggtgcaaagcacttcattcgcagtctcgcaccatctcttgttgta
cgccaactgcggatccgtgctgaacagattaatcgcctgcctactgacaacctgcgagcc
atacaagaagacgaatcaacgctcattaaaggtcttcacggcaaaagacaacataccgtc
actgaccattgtaccgagcttcgcgtaagcttcacgcctgtcgagttggtaaagattgat
cttagccaagaggatccagatgatgatgtagacgccccgccgtctagttcccaacaggat
atcggagatgtggatctggacgaagacatgcccttggacatggaggaagagggtcctagg
aaacgtgggccgaccaaatttgaccctgaaaaaccggcacgtatatgggttatggaaaca
tttgtcaaagtcggtgtgccactcaaagttcaagattgggaggctggacgacaggcaaag
cagaagcctagacgagcagcatcggtacatgacactgacactgccgcacagaaagccaag
acaaccacaaggcggacgaagacgactaaagaccaaccccaagttcgaatagaatcgttt
gcaaaggtcacaaaacctggagtgagagcttcacgagcacttgcaaaagcccaagacaag
gctggcgagcttccagcgccatcatcgcagaccactggaaaggcagagtatgaaacaatt
gacttatcatcctcatcgccattgaagccacggaccctaacaccacgatcacaaccggac
cctggaaagtcgctctccccagttctggaagatttgcctccaagtgtaagtaaacgaaga
aggcgagccccaattcagcgttcaaaaacgcttcctgccgacaccagcgacatcttggat
cggccttccacacctccacttttgaggacgatagaaacattggatttagccgagtctcca
gcgcatccttcacctttgcagctaccagcaaagaaggcgaagacaagaacattgaaagaa
gtggctgcaaccagaacgtcccgggactcgtctgtgccaaaacagactaccttagatgca
tggcgagcatcagcgacaccaaccaaacagcagggcacaactcttttatctggtgcagca
ctagtccctgcgccaccacaattcgccgaaccatctgaagatgtggaatcactggacttg
acgctctcctcaccaaagcgcccaaaagcaacacgacgctctcaaaaggaggctactagt
gagcagaatcctatggtatcatcgaccacacggccgccattgacgtcaatatcatcaaat
atgtctgcgagctcgacctcatcagtctcaatattgggcaagaagaaaagcattaaggat
gtttttcgctcaaacccacctcgcagtacttcgccacgtctcagcaaaacgacatcatcg
cgttccagtgtcgacactttagacctcacgtcccctcgtcctgctgcagcaaaatcacgg
tcgacatcgccacaagcggatgtgcttgatctgacagaacagttgtcacccgcggggggg
tgtgatccggttccacaaccaacaactgtaacaccggtatcacctccaacgcgttcatca
cggtcaccaagcgaagaaaattccgtatcaccccccgcagcatggaaagctcagaataag
aagaaacgggccattattctcagaaaaagcgtcgtaggcgcctgggactacgtcgacatt
gacagtccagagaagccgacgggtcagacaccggggtccttgctcaaagggaaggataga
cgcaagtggagagaaagcgcggtagaagttttggacttgacgtag
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