Bipolaris oryzae: COCMIDRAFT_88694
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Entry
COCMIDRAFT_88694 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K11267
sister chromatid cohesion protein PDS5
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_88694
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_88694
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
COCMIDRAFT_88694
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
COCMIDRAFT_88694
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT
HEAT_MROH2B_C
Cnd1
TPR_IPO5
DUF8567
Motif
Other DBs
NCBI-GeneID:
19127329
NCBI-ProteinID:
XP_007685541
JGI:
Cocmi1_88694
UniProt:
W6ZDD2
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
MAPRSRRSAAAATEAVQEEEQQEEEQQQEEQEQHGLKKLRFKQPLVGRPGKPVGVSDLLT
RLKALLDELRTIDQEEAHRDSLMPVAESLAHHSLLQHKDNGVRAWTVCCIVDMLKLFAPD
APYPASKLKEIFSVIIHKLLPLLADPSHPYNSQHMYILRSLAEWKSILLINEIPGSDQLT
SALFTTCFDVLSGPSKAEDLSKNIEHNMTEVLSTIIDEAPSVTHDVVDVIVAQFLWADPI
TLGASKSKKSIQVDAKQSTLRRKEAPPAYNMAKNVCNSFPDKMARLIGNYFSSVIVDFTN
SGTTYKAHDADDDLPKGPSEEDLNEAHKAHRLLRELWKCCPGVLQDIIPHLQDELATENV
QLRQLATETFGDMISGIGAAGPPPLPDLDPVAYPSQSLSRTESARPFDYLTTPVSINSFP
TQYPVAYHSFLQRKNDKSAVIRASWTTGIGRILMTSAGGIGLDLEEEQKLLKHFAECLID
SDEKVRLAAVKAVAHFEFNDIVRKLGSNGGMAETGSILSNLADRVKDKKSVIHSESMKLL
GRIWGVAAGAIAEGDEIIKSLLGPIPSRILEACYVNDLEINVQVDLALYDSLLPLGYPPL
KAKAAPNSQVVKDSQTANEQSYTEADLDKIRTERQLVLVNGLEEKAKKVFFAKQGNQGPG
AKYMEHFLKLCEEYNGGVTDKSGKDVTTNLEGLITYYAKTLPDSTRVRDDLWKFAKTHDR
RAYALIRFSMDPASDYRKVYRSIKELRKRIEDGPGASLLDTLTPLLYRVSLLCYNKSHVP
AVIEFTRTDNKGLGATAHELLKEISTKHPKVFSTHVKDLCKTLESEAPTATKPNPPGAVD
DLKACAAFARKFPTDIPMNGKDSRKLVQSFLNFAFYGTPPQAAKHAITIIMNSDDKKEMH
AKEILTKSIKGFEYGGAHWLTKLAALSQLVLLAQSDCEDEMDAVIEVAIQEVLQKPHVTS
TEADAEWMETPDADIQGRSWAIKILVNRLRSLPAEATSKEAVQDTYTLLNRFVQNNGEGS
TGDSTPAAHKSRQRLLAANSLLKLSCHKRLDLFLTPANFVQLALVTHDPCTQVRKGFADK
LMKYLGQGRLPPRFYTILFFLAHDPDKNIKNGTMTWIRARRTAFAARKETVLESVFARLL
SLLAHHPDFDTEDDTLKLMSEYILYYLKCVATEENLPLIFHVAQRVKGVADGISPSRQAD
ENLYILSDLAQALIRSWEEQNNWTMQLYPGKMKLPSGIFRPLESHERAQEIAMKTWIGED
LVDDLDPLVRKYIRNKKRKASEGAEKPRKKAKGDRPIKEKKARADRPVKTPKKKRRGGDD
DDASDVDGGIAPSSGPRRKSDRRSTVHKSYVEVSSDDEDADAGTEEAEEDDADASEDEEA
EDKSSPAPEEDVEMVDTETLAEQEAEATAETSEPPSEAEPEPESAPVRKSARGKAADKTN
GVKSSPAQKRRAAEPVKEDTPPKSAKSATKTRTTRAKANGTAPAVPSSPTANGTPIVRRS
GRARA
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgcagtcggcggagcgcggccgctgcaactgaagctgtccaagaggaggag
caacaggaagaggagcagcagcaggaagagcaggagcagcatggcctcaagaagctccgc
ttcaaacagcccttggttggccgcccaggcaagcctgtgggcgtcagcgacctcttgacg
cgactaaaggcacttctcgatgaactacgcaccatcgaccaggaagaggcccaccgcgac
tcgctcatgcccgtcgccgagtcgctcgcccatcacagcctgctgcagcacaaggacaat
ggcgtgcgcgcctggaccgtgtgctgcatcgtcgacatgctcaagctgtttgcgcctgat
gcgccctatcccgcatccaagctcaaggaaatattctccgtcattattcacaagcttctt
cccctcctcgccgacccctcgcacccatacaacagccaacacatgtacattctgcgctcg
ctcgccgaatggaagagcattctgctcatcaacgagatcccaggctctgaccagctcacc
tcggcccttttcaccacctgcttcgacgttctgtctggcccctccaaggccgaggacctg
agcaagaacattgagcacaacatgaccgaggttctctctaccatcatagacgaggcccca
tcagtaacgcacgatgttgtcgatgtgatagttgcacagttcctctgggcagaccccatc
accctcggcgcttcaaagagcaagaagagcatccaagtagatgctaagcaatcgacgctg
cgtcgcaaagaggccccacccgcatacaacatggctaagaacgtctgcaactcgttccct
gacaagatggcgcgcctgattggcaactactttagttccgtcatagtcgactttacaaac
tctggcacaacatacaaagctcatgacgctgatgacgacctaccaaagggcccttctgag
gaggacttgaatgaggcgcacaaagcacatcgcctactgcgcgagctgtggaaatgctgc
ccgggtgtcctccaggacatcatcccgcacttgcaggatgagctcgccacagagaacgtg
cagcttcgtcagcttgcgaccgagacctttggtgatatgatttcggggattggcgcggca
ggccctcctcctctacccgaccttgatccggtcgcatatccctcgcaaagtctgtcgcga
acagagtctgcgcggccttttgattatctcactactcctgtttccatcaactcgtttcct
acacaataccccgttgcatatcattcgttccttcaacgcaaaaacgacaaatcagccgtt
atacgcgcctcatggaccaccggcattggccgcattttgatgacatcagccggaggcatt
ggtcttgatctcgaagaagagcaaaagctgctcaaacattttgctgaatgtttgattgac
agtgacgaaaaggtgcggttagcagccgtcaaggcagttgcacactttgagttcaatgac
atcgttcgcaaactaggcagcaacggcggcatggcggaaactggctctatcctttccaat
cttgcagatcgtgtcaaggacaaaaagagcgtcattcattctgagtccatgaagctgctt
ggtaggatttggggcgtggcggctggtgccattgccgagggcgatgaaattatcaagtca
cttttgggtccgatcccttcacgcattctcgaggcttgctacgtaaacgatcttgaaatc
aacgtccaagtcgatttggcgttgtacgactccttgctaccgctcggatacccgcctcta
aaagcaaaggcagcgcccaactcacaggtagtcaaggacagccaaacagcaaacgaacaa
agttacacggaagcagacttggacaagattcgaaccgagaggcaactcgttcttgtcaat
gggcttgaagaaaaggccaaaaaggtattctttgccaagcaaggaaatcaaggcccaggc
gcaaagtacatggagcatttcctgaaattgtgtgaagaatacaacggcggtgtgactgat
aagagcggaaaagatgttacaaccaacctcgaaggcctcattacctactacgcaaagaca
cttccggactcgactagggtcagggacgatctttggaagtttgccaagacccacgatcgc
cgcgcctatgccctcatacgcttttctatggacccagccagtgactaccgcaaggtttac
aggtcgatcaaagagctcaggaagaggatcgaggatgggcctggtgcatctctgcttgat
accctcaccccactcctctatcgtgttagcctattgtgttacaacaagagccatgtcccg
gctgttattgagttcactagaaccgacaacaagggcctcggtgctactgctcacgaactt
ttaaaggagatctctacgaagcatcccaaggtgttttccactcacgtcaaagatttatgc
aagacacttgagagcgaagcgcccacggcgaccaagccaaatcctcctggtgctgtggat
gacctcaaggcttgtgccgcatttgcaaggaaattcccaacggacattcccatgaacggc
aaggacagccgaaaattggtacagagcttcttgaactttgcattctacggcacacctcca
caagctgccaaacatgcaatcaccatcatcatgaacagcgacgataagaaagaaatgcat
gcaaaagagattctcaccaagagcatcaaaggctttgaatatggtggtgcacattggctt
acaaagctggcagcactcagccaattagtcctgcttgcccagtcagattgtgaagacgag
atggatgcagtgattgaagttgcgattcaagaagtccttcaaaaaccacacgtaacatcc
accgaggctgatgccgaatggatggagacacctgatgctgatattcaaggtcgatcctgg
gccataaaaattctcgtcaaccgactccgctcgttacctgccgaagcgacttccaaggag
gcagtgcaggacacatacaccctactgaatcgttttgtgcagaacaatggtgaaggatcc
accggcgacagcactccggctgcacacaagtcgcgtcagcgcctccttgcagccaactcc
ctgctcaaactttcttgccataagcggctcgacctcttcttgacacctgcaaactttgtt
caactagcccttgtgacgcatgacccttgtactcaagtacgcaaaggctttgctgacaag
ctgatgaagtaccttggccaaggtcgtcttcctccccgcttctacaccatactctttttc
ctcgcgcacgatccggacaagaacatcaaaaacggcacaatgacctggattcgtgcacgc
cgcactgcctttgctgcgcgaaaagaaacggttctagagtcggtatttgcgagattgttg
agtttactcgcccaccacccagatttcgacaccgaagacgatacgctgaagctcatgtcg
gagtacatcttgtactatctaaagtgcgtggcaaccgaagaaaatttgcctctcatcttc
cacgttgctcaacgtgtcaaaggcgttgcagacggaatttcgccttcacgacaggctgat
gagaatctatacatcctatccgatttagcacaagccctgatccgctcatgggaggagcaa
aacaactggaccatgcaattgtacccaggaaagatgaagctcccgtctggaatcttccga
cctcttgaaagtcatgagcgggcacaggaaattgcaatgaagacatggatcggtgaagac
ttggtggacgacctcgatcctctcgtgcgcaaatacatccgaaacaagaagcggaaggct
tcggagggtgcagagaagcctcgcaagaaggccaagggtgatcggcccatcaaagagaag
aaggctagggcagatcgacctgtgaaaacacccaagaagaagaggagaggcggcgatgat
gacgatgcaagtgacgttgatggtggtatcgctccatcaagtggtccccgcaggaagagc
gatcggcggagcactgtgcacaagagctatgttgaggtatcaagtgacgatgaagacgcc
gatgctggtactgaagaagcagaagaagacgacgcagatgcctctgaggacgaagaagcc
gaggacaagtcaagccccgcaccggaagaagatgtggagatggttgatacagaaacacta
gccgaacaggaagccgaagccactgcagagacatccgagcctccttcagaagctgagccc
gagcctgaatccgcgccagtcagaaaatctgccagaggcaaagctgcggataagaccaac
ggcgtcaagtcttctcctgctcagaagcgcagagctgctgagccggtcaaagaggacaca
ccgcccaaatcagcgaagagcgcaacaaaaaccagaacaacgagagccaaggcaaatgga
actgcaccggcagtcccgtcaagcccaactgctaatggcacgcccattgttcggcgcagc
ggtcgcgctcgtgcctaa
DBGET
integrated database retrieval system
