Bipolaris oryzae: COCMIDRAFT_8927
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Entry
COCMIDRAFT_8927 CDS
T03125
Name
(RefSeq) polysaccharide lyase family 1 protein
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
COCMIDRAFT_8927
Enzymes [BR:
bor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
COCMIDRAFT_8927
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
19127443
NCBI-ProteinID:
XP_007692125
JGI:
Cocmi1_8927
UniProt:
W6Z113
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MKYSLFAAVAAALATAVNAADGVKGAAEGFAKGVTGGGSAAPVYPKTNAELVSYLGDGQA
RTIVLTKTFDFTGSEGKATSAGCRPWGTGSACQIAINKDGWCDNYQKTAPKVASITYDKA
GVIGITVGSNKSLVGQGNKGVIKGKGIRMANGVKNIIIQNVRFTEINPQYVWGGDAITVD
GGDMIWIDHVTTDLIARQHIVLGEKASGRVTISNNEINGATAWSATCDGHHYWGIYLTGS
NDMVTLKGNYIHHTSGRSPKVAGNTLLHAVGNYFYANSGHAFEADAGAKIVAEGNAFQDV
KAACQTGLPGKVFASGGAACKSGLGRNCEANVYGSAAAIAGSDTSVIGSFSGKNIAAAVS
GANAKNVVNTAGYGRI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaagtactctctctttgccgctgttgcggctgctctcgctaccgctgtcaacgctgcc
gatggcgtcaagggtgctgctgagggtttcgccaagggtgtaactggtggtggcagcgcc
gcccctgtctaccccaagaccaacgctgagctcgttagctacctcggtgatggacaggcc
cgcaccattgtcctcaccaagacctttgacttcactggcagcgagggcaaggccacctct
gctggttgccgcccctggggaactggctccgcctgccaaattgccatcaacaaggacgga
tggtgcgacaactaccagaagaccgcgcccaaggtcgccagcatcacctatgacaaggct
ggtgtcattggtatcactgttggctccaacaagtctcttgttggccagggcaacaagggt
gtcatcaaaggaaagggtatccgcatggccaacggcgtcaagaacattatcatccagaac
gtccgtttcactgagatcaaccctcagtacgtctggggtggtgatgccatcaccgtcgac
ggcggcgacatgatctggatcgaccacgtcaccactgacctgattgcccgtcagcacatt
gtcctcggcgagaaggcttccggccgtgtcaccatctccaacaacgagatcaacggcgct
actgcctggtctgctacctgcgacggccaccactactggggaatctacctcaccggcagc
aacgacatggtcaccctcaagggcaactacatccaccacacctctggccgctcgccaaag
gtcgccggtaacacgctcctccacgccgtcggcaactacttctacgccaactccggccac
gcttttgaggcagacgccggtgccaagatcgtcgctgagggcaacgccttccaggacgtt
aaggctgcgtgccagactggccttcccggcaaggtctttgcttcaggtggtgctgcttgc
aagagcggtcttggccgcaactgcgaggccaacgtctacggttctgctgctgccatcgct
ggttctgataccagcgtcattggcagcttctctggaaagaacattgctgctgccgtatcc
ggtgccaacgctaagaacgttgttaacactgctggttacggaaggatctaa
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