Bipolaris oryzae: COCMIDRAFT_89307
Help
Entry
COCMIDRAFT_89307 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bor
Bipolaris oryzae
Pathway
bor00100
Steroid biosynthesis
bor00909
Sesquiterpenoid and triterpenoid biosynthesis
bor01100
Metabolic pathways
bor01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
COCMIDRAFT_89307
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
COCMIDRAFT_89307
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bor01006
]
COCMIDRAFT_89307
Enzymes [BR:
bor01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
COCMIDRAFT_89307
Prenyltransferases [BR:
bor01006
]
Terpene biosynthesis
Squalene/phytoene synthase
COCMIDRAFT_89307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
19127448
NCBI-ProteinID:
XP_007685766
JGI:
Cocmi1_89307
UniProt:
W6ZJQ7
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSPLGFLYYAVHPAELRSIIQWKVWHNPVHERDESKEPESLKRCYHFLNQTSRSFAAVIL
ELHPDLLAPVTVFYLILRGLDTIEDDMTIPLAKKEPLLRNFQDILEQDGWTFTENGPNEK
DRQLLVEFNVVIEEYKKIKPAYKDIIKDITRRMGNGMADYANNAEFNAGVKTIKEYELYC
HYVAGLVGEGCTRLFVEAGLANAALLKRPELMESMGQLLQQVNITRDVREDFDDGRRFWP
KEIWSKHVDNFEDLFKPENSEKALNASSEMILTALTRADDCLYYLAGLREQSVFNFCAIP
QSMAIATLEACFQNYDLFQKNVKITKGEACQLMVESTQNLQLVCEIFRRYARKIAKKNNP
HDPNFLKISITLGKIEQFIESIFPSQQPPPDRKAPATIEEAIKKQKEDAEANWDLIYVVA
AVIGTVLVMTSLMLFIAYLAGARFDIAWSQAKTDLGKLLGGAASTAPAQVTKVLETVEKS
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccttgggcttcctctactacgccgttcacccggctgaattgcgctccataatt
caatggaaagtatggcacaacccagtacatgagcgcgacgaatcaaaggaacccgagtcc
ctgaagcgatgctaccacttcctcaaccaaacaagccgtagttttgccgccgtcatcctc
gagttgcaccctgatcttttggcgcccgtcacagtattttacctgatcctgcgtggtctc
gatacgattgaggatgacatgaccatccctttggcaaagaaggagcctcttctacgcaac
ttccaggatatcctggaacaggatggctggacatttacggaaaatggtcccaacgagaag
gacaggcagcttctggtcgagttcaacgtggtcattgaggaatacaaaaagatcaagccc
gcctacaaggacatcatcaaggacatcaccaggcgcatgggcaacggaatggcagactat
gccaacaacgctgagtttaatgctggagtcaagacgatcaaagaatacgagctatactgc
cactacgtcgcgggcctggttggtgagggatgcacacgcctctttgtcgaggctggattg
gcaaatgctgcgctactcaagaggccagaactcatggagtccatgggccagctcctccag
caggtcaacatcacccgtgacgtcagggaggacttcgacgacggccgccgattctggccc
aaggagatctggtccaagcacgtggacaacttcgaggaccttttcaagccggaaaacagt
gaaaaggcactgaacgctagctcagaaatgattctgacggcattaacccgtgcggatgac
tgcttgtactatctggctggtctccgagagcagagtgtgttcaacttctgcgcgatcccc
cagtccatggccattgcgactctggaagcctgtttccagaactatgatcttttccagaag
aacgtcaagattaccaagggcgaagcttgccagttgatggttgaatctacacagaacttg
cagcttgtctgtgaaatttttaggcgatatgctcgcaagattgcgaagaagaacaaccca
cacgacccgaatttcttgaagatcagcattacattgggaaagattgagcaattcatcgag
tcgatattcccatcgcaacagcctccacctgaccgaaaagcaccagccacaatagaagaa
gcgatcaagaagcagaaggaagatgcagaggccaactgggacctgatctatgttgtcgct
gctgtgattggaactgttcttgtcatgacttcgctgatgctgttcatcgcctacctcgca
ggcgcccgcttcgatattgcctggtctcaggccaaaacggaccttggcaaacttctaggc
ggagcagccagcacggcacctgcgcaagtcaccaaagtcctagagactgtggaaaagagc
gaactatag
DBGET
integrated database retrieval system