Bipolaris oryzae: COCMIDRAFT_89391
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Entry
COCMIDRAFT_89391 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_89391
Enzymes [BR:
bor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
COCMIDRAFT_89391
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
COCMIDRAFT_89391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Nyv1_longin
Motif
Other DBs
NCBI-GeneID:
19127469
NCBI-ProteinID:
XP_007685792
JGI:
Cocmi1_89391
UniProt:
W6ZJX2
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MVRITTWNVNGIRNPFGYKPWSNNRTFNAMFDILEADIVIMQELKIQRKDLTDDMVLIQG
WDCYFSLPKHKKGYSGVGIFTRQSVCAPIRAEEGVLGALCPPNSTTPYRELPESASIGGY
LTPEQIAGLPPDLDAESLDLEGRCLILEFPAFVLFGVYSPANSNGLRDGFRIGFLIALET
RIRNLTKMRKNVILTGDLNVSRDVIDTARAEEHIRTEGMTHDEYLSIPNRRIFNQLLLNG
KVPGQRDEGREEPVLYDLCREFHPDREGMYTHWEQKINARPSNFGSRIDFILCSIVIKDW
FQDANIQEGLMGSDHCPVYAVLKDKVRVQRTPGTESVEEEVHVLDLMNPADMFKDGVRQR
DYDPAKDVPALSGKLLSEFTKRRNIRDMFSKKPAPPMPTPKPTPTEAQPDVTKAQTASTA
STAEEQMDRDLALAIEASKADMLANTENNPTSSQSPLKSAEKRRASASASPGKPIKRGKP
GALAVSTKGNKGQQSLKGFFQTHSKSADPITPNDAAPSVSSLATTDTAGQTTTDKPPPPP
TSTTTESFDSDPRASQEASREGWTKLFSKKAAPRCEHGEPCITLTTKKPGVNCGRQFWVC
PRPIGPSGHKEVGTQWRCGTFIWCSDWKGS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcatcaccacatggaatgtcaacggcattcgcaacccatttgggtacaagcca
tggagcaacaatcgtacctttaatgccatgttcgatatattggaggccgacattgtgatt
atgcaagagttgaagattcagcgcaaggacctgacggatgatatggtccttatacaaggc
tgggattgctacttcagtctgcccaagcacaagaagggatactctggtgtcggcatcttt
acacgacaatccgtatgcgctcctatccgtgcggaagaaggcgtcctaggcgctctttgc
cctccgaattcaacaacgccttaccgtgaactcccggaatctgccagcatcggcggctac
cttactcccgaacaaattgcaggccttcctcctgacctcgatgcagagagcttagatttg
gaagggcgttgtctgatcctggagtttccggcttttgtcctttttggcgtctatagccca
gcaaacagcaatggcttacgggacggattccgcattggctttctcatagctcttgaaaca
cggataagaaacttgacgaagatgagaaagaatgttattcttactggagacctgaatgtt
tccagagacgtgatcgatactgcgagggcagaagaacatatacggacggagggtatgaca
catgatgagtatctaagcataccgaatcgtcgaattttcaaccagctcttgctcaacgga
aaggttccaggtcagcgagacgagggacgcgaagagccggtgctgtatgatttgtgtcgc
gagttccaccctgatcgtgaaggcatgtatacacactgggagcagaagatcaatgctagg
ccgagtaactttggatcacggatcgactttattctgtgtagcatcgtcattaaggattgg
tttcaagacgcgaatatccaagaaggactgatgggctcagatcattgtccggtatacgcg
gttttgaaagataaagtacgagtacagcggacaccaggaacagaaagcgtagaagaggag
gtgcatgttctagacttaatgaacccagcagacatgttcaaagacggtgtacgccaacgt
gattacgatccagccaaggacgtcccggcccttagcgggaaacttctttcagagttcact
aagaggaggaatattcgggacatgttcagtaaaaagccagcacccccgatgcctactcca
aaacctacgcctacagaagcccagccggacgtcacaaaggctcagaccgcaagtactgca
agcacagcagaggaacagatggatagagatctagctttggcaattgaggcttctaaagcg
gatatgcttgcgaatacggaaaacaaccccacatcttcgcagagtcctctcaagtccgct
gaaaaacgacgcgcatcagcctctgcgtcccctggaaagccaatcaagcggggcaaacct
ggtgccctagctgtgtctactaaagggaacaaggggcaacaatcactcaaaggtttcttc
cagacacatagcaagtctgcagatcctattacgcccaacgacgcagcgccatcagtctca
tcccttgcaaccaccgatactgcaggtcagactactacagacaaacctccgccccctccc
acgtcgacaactactgaatcctttgactctgatccccgcgcctctcaagaagcatcaagg
gaaggctggacgaagcttttctctaagaaagcagcgccccgatgtgaacatggcgaacct
tgcatcactctgacgactaagaagccaggagtcaactgtggacggcaattttgggtgtgc
cctaggccgattgggccttcaggacacaaggaagtagggacgcaatggcgttgtggaacg
tttatctggtgtagtgattggaaaggcagttga
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