Bipolaris oryzae: COCMIDRAFT_89922
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Entry
COCMIDRAFT_89922 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
bor
Bipolaris oryzae
Pathway
bor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCMIDRAFT_89922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_89922
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
COCMIDRAFT_89922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
19127575
NCBI-ProteinID:
XP_007685950
JGI:
Cocmi1_89922
UniProt:
W6Z745
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MQHFLAHQQQYGEWGQGHHQQPQHHVAQHGQHQTQAAQLHAQQQAQAVQAAAQRQYHQQL
AANNGSTLPGNNAVPRGPANDVQAADVGMTDENRRVLEWVTQLMKPATREAALLELSKKR
EQVPELALILWHSFGVMASLLQEIISVYPLLNPSQLTAAASNRVCNALALLQCVASHTET
RGLFLSAHIPLFLYPFLNTTSKSRPFEYLRLTSLGVIGALVKNDSSEVINFLLTTEIIPL
CLRIMETGSELSKTVAIFIVQKILLDDIGLAYICQTYERFYAVGTVLSNMVNQLVEQQTV
RLLKHVVRCFLRLSDNARAREALRQSLPEPLRDATFSSVLRDDAATKRCLAQLLINLSDN
VVDAANNQQLMH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatttcctcgcgcatcagcaacagtacggcgagtggggtcagggccaccaccag
cagccgcaacatcacgtagcccaacatggacagcatcaaacgcaggccgcccagttgcac
gcccagcagcaggctcaagccgttcaagcagctgcgcagcgccagtaccaccagcagctt
gcggccaacaatggctccacgctgcccggcaacaacgccgttccccgaggacctgccaac
gacgtccaggcagccgatgtcggcatgacggatgagaataggcgcgttttggaatgggta
acccagctcatgaagcctgctaccagggaggccgcgcttctggagttgagcaagaagcgg
gagcaggttcccgagctggctctgattctctggcattctttcggtgttatggcttctctc
ctccaagagatcatctccgtttacccattgctcaacccttcgcaattgaccgctgcagca
tctaaccgtgtctgtaatgctctcgcgcttcttcaatgcgtagcttctcacactgaaacc
cgtggcttgtttttgagtgcgcacattccgctcttcctgtacccgtttctgaacacgacg
tccaagtcacgacccttcgaatacctacgtcttacgtctcttggtgtaattggcgctctt
gtcaagaacgactcttctgaagtcatcaatttccttctcactaccgagatcatcccactc
tgtctccgtatcatggagacgggctcggagctcagtaagactgtggcgattttcattgtg
cagaagatcttgctggacgacattggtcttgcatacatctgccaaacctacgagcgtttc
tatgctgtaggcaccgtcttaagcaacatggtcaatcagctcgttgagcagcagacggtt
cgcttactgaagcacgttgtgcgttgctttctccgcttgagcgataacgctcgcgctcgc
gaggcgctgcgccagtccttgcctgagccactccgagatgctactttctcctctgttctc
cgggacgacgctgccaccaagcgctgccttgctcaacttttgatcaatctctccgacaat
gttgtcgacgcggcaaacaaccaacagctcatgcactag
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