KEGG   Bipolaris oryzae: COCMIDRAFT_89922
Entry
COCMIDRAFT_89922  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
bor  Bipolaris oryzae
Pathway
bor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    COCMIDRAFT_89922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bor03019]
    COCMIDRAFT_89922
Messenger RNA biogenesis [BR:bor03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     COCMIDRAFT_89922
SSDB
Motif
Pfam: Rcd1
Other DBs
NCBI-GeneID: 19127575
NCBI-ProteinID: XP_007685950
JGI: Cocmi1_89922
UniProt: W6Z745
LinkDB
Position
Unknown
AA seq 372 aa
MQHFLAHQQQYGEWGQGHHQQPQHHVAQHGQHQTQAAQLHAQQQAQAVQAAAQRQYHQQL
AANNGSTLPGNNAVPRGPANDVQAADVGMTDENRRVLEWVTQLMKPATREAALLELSKKR
EQVPELALILWHSFGVMASLLQEIISVYPLLNPSQLTAAASNRVCNALALLQCVASHTET
RGLFLSAHIPLFLYPFLNTTSKSRPFEYLRLTSLGVIGALVKNDSSEVINFLLTTEIIPL
CLRIMETGSELSKTVAIFIVQKILLDDIGLAYICQTYERFYAVGTVLSNMVNQLVEQQTV
RLLKHVVRCFLRLSDNARAREALRQSLPEPLRDATFSSVLRDDAATKRCLAQLLINLSDN
VVDAANNQQLMH
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgcaacatttcctcgcgcatcagcaacagtacggcgagtggggtcagggccaccaccag
cagccgcaacatcacgtagcccaacatggacagcatcaaacgcaggccgcccagttgcac
gcccagcagcaggctcaagccgttcaagcagctgcgcagcgccagtaccaccagcagctt
gcggccaacaatggctccacgctgcccggcaacaacgccgttccccgaggacctgccaac
gacgtccaggcagccgatgtcggcatgacggatgagaataggcgcgttttggaatgggta
acccagctcatgaagcctgctaccagggaggccgcgcttctggagttgagcaagaagcgg
gagcaggttcccgagctggctctgattctctggcattctttcggtgttatggcttctctc
ctccaagagatcatctccgtttacccattgctcaacccttcgcaattgaccgctgcagca
tctaaccgtgtctgtaatgctctcgcgcttcttcaatgcgtagcttctcacactgaaacc
cgtggcttgtttttgagtgcgcacattccgctcttcctgtacccgtttctgaacacgacg
tccaagtcacgacccttcgaatacctacgtcttacgtctcttggtgtaattggcgctctt
gtcaagaacgactcttctgaagtcatcaatttccttctcactaccgagatcatcccactc
tgtctccgtatcatggagacgggctcggagctcagtaagactgtggcgattttcattgtg
cagaagatcttgctggacgacattggtcttgcatacatctgccaaacctacgagcgtttc
tatgctgtaggcaccgtcttaagcaacatggtcaatcagctcgttgagcagcagacggtt
cgcttactgaagcacgttgtgcgttgctttctccgcttgagcgataacgctcgcgctcgc
gaggcgctgcgccagtccttgcctgagccactccgagatgctactttctcctctgttctc
cgggacgacgctgccaccaagcgctgccttgctcaacttttgatcaatctctccgacaat
gttgtcgacgcggcaaacaaccaacagctcatgcactag

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