Bipolaris oryzae: COCMIDRAFT_89925
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Entry
COCMIDRAFT_89925 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K11293
protein HIRA/HIR1
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_89925
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
COCMIDRAFT_89925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
EIF3I
HIRA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_WDR75_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Ge1_WD40
Beta-prop_IFT140_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
19127578
NCBI-ProteinID:
XP_007685929
JGI:
Cocmi1_89925
UniProt:
W6Z711
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MHLIKPQWLTHPGEQKDFEVYSCHVSPDGSRLATAAGDGYVRVWSTEAILKSNDPTYTKP
KQLAAVSHHSGTIHAVRFSSNGKYLASGADDKIVCVYALDKNAPTHAAFGSNEPPPVENW
RVIRRLIGHDNDVQDLGWSFDSSILVSVGLDSKVVVWSGHSFEKLKTLSNHQSHVKGITF
DPANKYFATASDDRTIKVYRFNSPPPNASQQDQVNNFVLDHTITAPFQTSPLTTYFRRCS
WSPDGAHIAAANATNGPVSSVAILSRGSWDGDISLVGHEGPVEVTSFSPRLFYRDPPRPE
KDGTITQPTVTIVACAGQDKCLSVWNTSFPRPFMISQELAGKSISDLAWSPDGETLYATS
LDGSIMTLVFETGELGYPATLAENEKTLAKFGAGRRVGIIEGTDALLLEESSKSGELKGV
QGRMGALMGDGGAVQPPTITNGTNGTTPSTTTTTTTTQTNGSSAAATTPAQPPAPVEPPP
DQRVEKLKQRVTVTKDGKKRIAPMLMSSSSGVGESSLPKTQLLSATTTSGGRSDNPHNIL
DLSKPYDGFPKGGLATLLIGNKRKFAEIEGDEDKQVERRLAASVKPGGAAIVLNSENGLI
PPAAAPPKNNEAHDPPKVLRPAIVNPSLSLAQVRLAVPKVRSVIVRTMDGSEPPQSGVDA
NTGKADIPDTVILEARNASGPSRTGRPQDHDPTRLTCTSKGQSLWQDFLPKAVLLVTGNT
NFFAAACEDGSVYAWTPAGRRTLNAMILEAQPVIMDCRGWWLMCITAVGMCYIWNLKSMS
SPHPPVSLAPILDIAAYAQGPHLTRSPGIVFARLNSAGRITVAMSNGEGYAYNPDMYIWQ
RLSEPWWGVTSQYWNSTDSSVGNIRSSQDKAVVKEKDDQVSPENISAGIIPALERNTTNQ
SLLQGRAFHLQRLIKILVSAEGYETFESSASVAHLENRVAAARTLGAKEEYKIYFTMYVK
RLGAEGLKGKIEELLRGLMGNLITTGDEDGDDNNTDEEQQGANEVIKEPSEICGWKKEEL
LKEAVLILGKHRDLQRITVPYARLLDIVTEGQRQDDQAMITDV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcatcaagccacagtggttgacacatcccggcgaacagaaagactttgaagta
tacagctgccacgtctcccccgatgggtcgcgcctggctactgctgccggagacggatac
gtacgcgtgtggtctaccgaagccatcctcaaatccaacgaccccacatataccaagccc
aagcagctcgcggccgtgagccatcattcaggaaccatccatgccgtccgcttctcgtcc
aacggcaaatacttggcatccggcgcagacgacaagatagtatgtgtctatgcgcttgat
aagaatgcgcccacacacgcagcattcggatcaaacgaacccccgcccgtcgagaactgg
cgcgtcatccgccgtctcataggacacgacaatgacgtgcaggatctgggctggtcattc
gattcttcgatattggtttccgtggggctggactctaaggtggtcgtctggtcaggccat
tcgttcgagaagctaaagacactgtccaaccaccaaagtcacgtcaagggcataacattc
gacccagctaacaagtactttgcgaccgcaagcgacgaccgaaccatcaaagtctacaga
tttaactctccaccgcccaatgcgtctcagcaagaccaggtcaacaactttgtcttggac
cacacaattaccgcgcccttccaaacctcccctcttaccacatactttcgccgttgctcg
tggtcgccagatggtgcccatatcgccgccgcgaacgccacaaacggaccagtcagttca
gtcgccattctttcgcgtggctcgtgggatggagacattagtcttgttggtcatgaaggg
cctgttgaggttacctcgttctctccacgattgttctacagggatccgccgcgtccagaa
aaagacggaaccattacacaaccgactgtgaccattgtcgcatgtgccgggcaggacaaa
tgcctgagcgtgtggaacacgagctttccgaggccattcatgatttcgcaggaactggca
ggaaagtcgatatctgacttggcatggtcaccagacggagagacactatacgcaaccagc
ttagacggcagtattatgacactggtattcgagacgggcgagcttggatatcctgccacg
cttgcagagaatgagaagacgcttgccaagtttggtgcaggtagaagagttggtatcatc
gagggcacagatgcgctactcctggaagaaagcagcaaaagcggggaattgaaaggcgtt
cagggtaggatgggtgcattgatgggtgatggcggcgcagtccaacctcctacaatcaca
aatggaacaaatggcactaccccgtcgacgacgacgacgacaacgacaacccagacaaac
ggatcctctgccgccgccactaccccagcgcaaccgccagcccccgttgagccccctccg
gatcagagagtagaaaagctaaagcaacgagtgacggtcacaaaagatggaaagaagcga
atagcgccaatgttgatgtcatcttcgtcaggtgtgggagaatcttccttgccaaagaca
cagctcctctccgcaacaacaacatccggtggcaggagtgacaatccacacaacatactc
gatctatcaaagccgtacgatgggttcccaaagggtggcctcgccactttgcttattggt
aacaagaggaagtttgctgagattgaaggagacgaagacaagcaggtcgaacggagattg
gctgcttctgtgaaacccggaggtgctgcaatagtactcaatagcgagaatggtctcatt
ccgcctgctgctgcaccgccaaagaacaatgaggcgcatgatccacccaaagtactcaga
ccagctattgtcaacccatcgcttagtttggctcaggtgcggttggcggtgcctaaagtc
aggagcgtcatcgtgcgaactatggatggcagtgagccaccgcagagtggtgttgatgcc
aatacaggcaaagcagatataccggacactgtcatactggaagcacgcaacgccagtggt
ccatcacggactggacgaccgcaagatcatgatccaacaagactgacctgtaccagcaaa
ggacagtcactttggcaggacttcttgccaaaagctgtgttgctggtaactggcaacaca
aactttttcgccgcagcatgcgaggatggttcagtttacgcatggaccccagcaggccgt
cggacactaaatgccatgattctcgaggcccagcccgtcatcatggactgtcgtggctgg
tggctaatgtgtataacggcagttggcatgtgctacatctggaacttgaagagcatgtct
tcgcctcacccacctgtttcactggctcctatcctcgacatagcagcatatgcccaagga
ccacaccttactcgatcgcctggtattgtatttgcacgcttgaattcggccggtcggata
acagtcgccatgtccaacggtgaaggatacgcatacaaccccgatatgtacatctggcag
cgcttgtcagaaccatggtggggtgtcaccagtcagtactggaattctacggactcttcc
gttggcaacatccgctcgtcgcaggataaggctgtagtaaaagaaaaggacgaccaggtt
tctccagaaaatatctcagcaggtatcatacctgctctcgagcgcaacacaacgaaccaa
tccctgcttcaaggccgcgccttccacctccagcgactgatcaagatacttgtctctgca
gaaggctatgagacgtttgagagcagtgccagtgtagcacaccttgagaaccgtgtcgct
gcagcccgtacattgggcgcaaaggaagaatacaagatctactttaccatgtatgtcaag
cgacttggtgccgaaggtctcaagggcaagattgaagagctgctgcgaggtctgatgggc
aatcttatcaccactggcgatgaagatggcgatgacaacaataccgatgaagaacaacaa
ggcgccaatgaagtgatcaaagagccctctgaaatctgcggctggaagaaagaggaattg
ttgaaggaagctgttttgattcttggtaaacaccgcgatctacagcgcatcaccgtaccg
tatgcgcgtctccttgacatcgtcaccgagggtcagcgccaggacgatcaagctatgatt
acggacgtgtaa
DBGET
integrated database retrieval system