Bipolaris oryzae: COCMIDRAFT_90913
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Entry
COCMIDRAFT_90913 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K25178
coiled-coil domain-containing protein 174
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_90913
03041 Spliceosome [BR:
bor03041
]
COCMIDRAFT_90913
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
COCMIDRAFT_90913
Spliceosome [BR:
bor03041
]
Complex C
Other components
EJC/TREX
COCMIDRAFT_90913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
19127784
NCBI-ProteinID:
XP_007686372
JGI:
Cocmi1_90913
UniProt:
W6Z631
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MSSKDAHLYGARPKGRAKAKEISSSSSLAFASTLSNLIKSSSSESNKPTAGRARPQKEDI
FKTHNKNVNKRALKDLEDADFTQKHRGRTAEEKGEDEVAWKRTKRRMEEKARLYDALKRG
DVEDVDEKYGVDFDRKWADKQEKGEAPSASDSSSSDDEEEQELIEYIDEFGRTRKGTRAD
AAREERRKRTLAADEPDRFTARPSMPDSLIYGDAVQTQAFNPDATIAQQMAELAAKRDKE
LTPPPDLHFDGRAEVRQRGMGFFNFSKDEEERREQMARIEREREETERVRSERARRVEER
REMIRKKKRVILEKRSKGQAERFLDELGAELLGKEEGGDAPKEKGNVAKTGDEKDEAKKE
DSA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaaggacgcccacctttacggcgcacgcccaaagggacgcgccaaagcaaaa
gaaatctctagctcgagtagcctcgcttttgcatccacgctttccaacctcatcaagagc
tcgtcttccgaatccaacaagcccactgccggacgcgcgcgaccacaaaaggaagacatt
ttcaagacacacaacaagaatgttaataagcgcgcgctcaaggacctcgaagatgcagat
tttacacagaagcaccgcggccgcaccgccgaagaaaaaggcgaggacgaagttgcctgg
aagcgcaccaagcggcgaatggaagaaaaagcccgcctctacgacgccctaaaacgcggc
gacgtcgaagacgtcgacgaaaaatacggcgtagatttcgaccgaaaatgggcagacaag
caagaaaaaggcgaagccccatctgcttcagactcctcatcctcagacgacgaagaagag
caagaactcatcgaatacattgacgaattcgggcgcacacgaaagggcacccgcgccgac
gccgcccgtgaagaacgccgcaaacgcaccctcgccgccgacgaacccgaccgcttcacc
gcgcgccccagcatgcccgactccctcatctacggcgacgccgtacaaacccaagccttc
aacccagacgccaccatcgcccagcaaatggcggagctagccgccaaacgtgacaaagaa
cttacaccgcccccagacctgcattttgacggccgcgcagaggtccggcagcgcggcatg
ggcttctttaatttctcaaaggatgaggaggagaggagggagcagatggcgcggattgag
agggagagggaggagacggagcgggttaggagcgagagggctaggagggtggaggagagg
agggagatgattaggaagaagaagagagtcatactggagaagaggagtaaggggcaggcg
gagaggtttttagatgagttgggagcggagttgttggggaaggaggagggtggggatgct
ccaaaggaaaagggaaatgttgcgaagactggggatgagaaagatgaggcaaagaaagag
gactcggcgtaa
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