KEGG   Bipolaris oryzae: COCMIDRAFT_9232
Entry
COCMIDRAFT_9232   CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
bor  Bipolaris oryzae
Pathway
bor03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCMIDRAFT_9232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bor03041]
    COCMIDRAFT_9232
Spliceosome [BR:bor03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    COCMIDRAFT_9232
 Complex C
   U5 SnRNP specific factors
    COCMIDRAFT_9232
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_SCAP NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR75_2nd PEP5_VPS11_N VPS11_N Beta-prop_BBS7
Other DBs
NCBI-GeneID: 19128052
NCBI-ProteinID: XP_007692491
JGI: Cocmi1_9232
UniProt: W6YZN6
LinkDB
Position
Unknown
AA seq 359 aa
MSREKRPANEAFGTSQLVKRTKSDANLGGSSAVAVVNGSGANGALIQAGSRSSALQSPVM
ELTGHSGEVFAARFDPTGQCIASGSMDRSILLWRSSDTCENYGILTGHKQAVLDLHWSRD
SRVLFSASADMHLASWDVETGERIRRHPGHEEVINCMDVSKRGEEVLVSGSDDGYIGIWD
TRTKDAVTFIQTDFPITAICLAEAGNELFTGGIDNDIKVWDLRKQAVTYTLIGHTDTVTS
LQMSPDNQTLLSNAHDSTVRTWDVRPFAPADRRIQTYDGAPTGQERNLLKASWDFKGEKI
AAGSGDQSVAVWETRTGKLLHKLPGHRGAVNDVRFHPLGEPILVSASSDRKVMVGELGK
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtctagagaaaagcgacccgccaatgaggcttttggtacaagccagttggttaagcgc
accaagtcggatgccaaccttggaggaagctctgcagtagctgtagtcaacggctcgggc
gcaaatggcgccctcatacaagcggggtcgcgctccagcgcactgcagtcgccagtcatg
gaattaacaggccactcaggcgaagtctttgcagcacgattcgacccaacaggacaatgt
atcgcttctggctctatggatcgttctatattgctttggcgcagctccgacacttgcgaa
aactatggcatcctcactggtcacaagcaggcagtactcgacttgcactggtcacgcgat
tccagagttctcttctccgcatcggcagacatgcacctagcaagttgggacgtcgaaact
ggagagagaatacgaagacatccaggtcatgaggaggttatcaattgcatggatgtgagc
aagcgcggtgaagaggtgctcgtgagcggttccgacgacggctatattgggatttgggac
actagaacaaaagatgcagtaacctttatccagacggactttcccataacagcaatatgc
ttagcggaagctggaaacgagctattcacaggcggcattgacaacgacattaaagtctgg
gatctgcggaaacaggcagtgacatacacactgattgggcacaccgacacagtcacttcg
ctccaaatgtctccagacaaccaaacactattatccaacgcacacgattcaactgtcagg
acatgggatgtaagaccctttgctcccgctgaccgacgcatacaaacgtacgacggagcc
cctaccggacaagagcgcaacctcttgaaggcaagctgggacttcaaaggcgaaaagatt
gcagctggtagcggggatcagagcgtggccgtttgggagacacgaacagggaaactcttg
cacaagctgccaggccaccgaggcgccgtcaatgacgtgcgtttccaccctcttggcgaa
cccattttggtctccgcctcgtcagaccgaaaggtcatggtgggcgagctcggcaagtga

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