Bipolaris oryzae: COCMIDRAFT_92507 Help Entry COCMIDRAFT_92507  CDS       T03125                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism bor  Bipolaris oryzae Brite KEGG Orthology (KO) [BR:bor00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bor03021]     COCMIDRAFT_92507 Enzymes [BR:bor01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      COCMIDRAFT_92507     5.6.2.5  RNA 5'-3' helicase      COCMIDRAFT_92507 Transcription machinery [BR:bor03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      COCMIDRAFT_92507 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_19 AAA_30 Viral_helicase1 UvrD-helicase DEAD nSTAND3 ResIII DUF7386 Annexin Motif Other DBs NCBI-GeneID:  19128093 NCBI-ProteinID:  XP_007686903 JGI:  Cocmi1_92507 UniProt:  W6ZS74 LinkDB All DBs Position Unknown AA seq 1976 aa AA seqDB search MAEILEKINELRELPEDQHLFCPRIGDDGSVYYDEDIAAYPPETDPAELEDRRIKLQAAE ERKWTALKATEILAFDGEEAAPHKEWLISWLNHLMQSCDVCVRVFHQSRAEWRTRLLDSY DEENIGPFLEVVDAQCLQRIHKGLDEAAEILRKAEPKTRSVRLLPNECTYGFFEALSCDA LIRNEELLQKHFDAPFDMVQTKKRLKVQTYLPAMTRFLFSRVERRQKWATESWSTFKRNM LKSEWDWAVRDYVTSAMMKIQMYNLDISMVPLFWSGARLIVAKMDRHLITESLRGLDGDF YRLMLDHLSLKSEGFLDLIATMKQLLEKSPVDYWDGMNAVTPSIATVVEQVFNSPVFNQI LLAAAEDKEQNMNNLHSAFGWIPPFLDSIKLANLGPAVRPFAQALLGRFQSDKYPQKSRE YCYREGLKVLDYAFRKMGEGKTIDRFVGQPTVNSMLDVLSTYIQALVVNLKRFKSSKESQ GDFQLALSVIEHAFKLEAQSLIIERQLISAKQPSPTETPPSSPIWKTVLRAIGPDSLELA THMLIAGRGLIGLEPLQMKSGVDKVPPTVRHFNDRFRLLSQSITDVVEKMSEFEPNLLQA LFGQQPAASAIVSLMFSSTEDTRNSAIELLKVISGEEERRGALQHILKAHYRHVVRGISD SVRQVRLKKAFSPVPSMIRTCNDIIDIICNTQDGILRGREYESGDAAATMNLWENLWDSL TMIFATTEAWSNLGFYDKSMMMDFCRDTMQFADVLFDQCSIFATALKPPSSDDEEATSKT QLLKELLARPANAMEGLARWLRLRDEFLSSKSVTLISKLLVRLHRVSIEIDADTLSYMER VLSGDVRAKLSDTQQAELQQALEEHLGRPLVKEEEPVKPKQVSISKWMAPGAASSSPADA KAKLLASMTSGSSKFQERREQMKAAEKAAQKAAEDKKNATQAEFKRKRQLDKEKREREKA AAVAKAKAARGITAEAGSGLEGLGVLGKDQAAKGEGLMHSSDESSDEEGDIDEDLFGIKK EKVKAGPRTNIVNEVKIQMPTKKKRAQRSAKDMRARLAPDLSSLHRTILSWNYFHEGDFP PKSRPELYSKVLNTFRTPNDYQNTFEPLLTLEAWQGFVKAREENQARPYEIRITSRAAVD MFQEIGSTMTHVENREVFISEGDIILFSQSKNPSAEEPTCLARVFRVKRKQQHIEVSYRV VPGNPLNSALQPNNTLLGTKLQSITPLEREYGALKGLQYYDLCDEIIRAKPSPLLTYKDS QIQPLISNYNVNTAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAIVGAILSDSLRNRGT AISVPGQQRSEAASKKLLVCAPSNAAVDELVMRFKDGIKTLNGESRKVNIVRLGRGDAIK ASVQDVTLEELVNQRLGVDPSDSKDKEATQKLFQDHKKISDQLKQAYQQRDSGEVKGEAA AKLEEDINALRRQKTALGTKIDNVKDDEKLASRNADLNRRRAQEAVLNEAHVICATLSGS GHEMFQGLSIEFETVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTVFSKEAARF QYEQSLFVRMQKNHPNDVHLLDTQYRMHPEISLFPSQTFYDGRLLDGGDMAGLRKQPWHQ SMVLGPYRFFDVKGQQAAAPKGHSLINVAEIKVAMQLYKRLTSDYPDYDFKGKVGIITPY KSQLRELKQSFMQVYGQSIIEDIDFNTTDAFQGRESEVIIFSCVRASPAGGIGFLQDIRR MNVGLTRAKSSLWVLGNSESLQRGQYWNKLIVNAKERNRFTDGDVPKMLNQHSSKFPAPK GGYVQPNRPTPEVKSEVKSEPMSRTGSNQSDSTSSSDAKHIKQEIKQEIKQEIKAEHKLV QHTKRKLDQEPNGVDSLKLESSDVEMDDIASDAASNPMNGGSGRSTPALADPSRQNSTTS TSADATNGSSSGATNGSTVPLPTDVIGGMSMAKPKIRRRPREPANPFIKNKKPRTG NT seq 5931 nt NT seq  +upstreamnt  +downstreamnt atggcggaaatactcgagaagataaacgagctccgagagctgcctgaagaccagcatctc ttctgtccccgcatcggtgacgatgggtctgtttactacgacgaagacattgccgcctac ccaccggagaccgaccccgccgaactcgaagatcgtaggataaagcttcaagcagccgag gagcggaaatggacggcactcaaggcgacggagatactggcatttgatggagaggaagca gcaccacacaaggaatggctgattagctggctcaaccacctgatgcagagctgcgatgtc tgtgtgagggtctttcatcagtccagggccgagtggcggacacgtctgctcgactcgtat gatgaggagaacatcggcccattcctagaggtggtggatgctcaatgcctgcaacgcata cacaagggcctggatgaggcggctgagatcctccgtaaagccgaaccgaaaacacgctca gtacgactactgccgaacgaatgcacttatggcttcttcgaagccttgagctgcgatgca ctaatacggaacgaggagctcctccagaaacactttgacgctccctttgacatggttcaa acgaagaaacgattaaaggtccagacataccttccagccatgacgcgcttcttattcagc cgggtcgaacggcgtcaaaaatgggcgacagagtcgtggtctacttttaagcgcaatatg ttgaagtctgagtgggattgggctgtgcgggactatgtcacaagtgccatgatgaagatt cagatgtacaacctcgacatctccatggtacctcttttctggagtggcgcgcggctcata gtcgcaaagatggacagacatctcattacagaatccttgcgaggtctagacggagatttt tatcggctgatgctcgatcacctttcgctgaagtcagagggcttcttggacttgattgcg accatgaagcaactgctcgaaaagtctccagtcgactactgggatggcatgaatgcggtt accccgtctattgcaacagtggttgaacaagtgtttaacagtcctgttttcaaccaaata ctcctagcagcggcggaagataaagagcagaatatgaataatcttcattctgcctttggc tggataccgccttttcttgactcaatcaagctggcaaatcttggaccagcggttcggcct tttgctcaagcgctccttggccgctttcaatcagacaagtacccgcaaaagtctcgggaa tattgctatagggaaggtcttaaagtactggactatgcattccgcaaaatgggagaaggc aagactattgatagatttgttggccagcccacggtcaacagcatgcttgacgtactatct acctacatacaggcacttgtcgtgaacttgaagcgtttcaagagcagtaaagaaagccag ggggactttcaattagcactctcggtcattgagcatgctttcaagctcgaggcacagtct ttgatcattgagaggcagttgatatctgcgaagcagccatcccccactgagacaccaccg tccagtcccatctggaagacggtcttgagggcgataggccccgacagcttggagctcgca acgcatatgctcattgccgggaggggcctgatcggccttgaaccactgcaaatgaagtca ggcgtggacaaagtgcccccgacggtgcgccatttcaacgatcgttttagattgttgtct caatctattaccgatgtcgtggagaagatgtctgaatttgagcccaacttgctacaagca ctgtttggccaacaacccgcagccagtgcaattgtctcgttgatgttctcatcaacagag gatacccgcaactccgctattgagcttttgaaggtcatcagtggagaagaagagcgtcgt ggggcactgcaacacatcctaaaggcccattacaggcatgtcgtgcgaggtatctcagat tcagtgcgacaggtcaggttaaagaaggcgttttcccctgtgcctagtatgatcaggacc tgcaacgacatcatcgacatcatttgcaatacccaagacggtatcttgcgtggccgagaa tacgagtcgggagacgccgcggcgacgatgaacctgtgggagaacctttgggactcactc accatgatctttgcaacgacggaagcctggagtaatttgggcttctacgacaagtccatg atgatggatttctgcagagacactatgcaatttgctgatgtcctgtttgaccagtgtagc attttcgcaactgccttgaaacctccttcctctgatgatgaagaggccacttcaaaaact cagttgctcaaagagctcctggcacgacccgcgaatgctatggaaggcttagcaagatgg ctgcgtcttcgtgacgagtttttgtcgagtaaatctgtcaccttgattagcaagcttctg gtccggttacatcgggtatccattgagattgatgctgatacgctctcgtacatggagcgt gtgctctcaggagacgtgcgcgcgaagcttagtgatacgcagcaggctgagctgcaacag gctttggaggagcatctcggacgcccgcttgtcaaagaagaggagcctgttaagcccaag caagtttccatcagcaaatggatggctcctggtgccgcttcatcatcacccgccgatgcc aaggccaagttgcttgctagtatgacctctggatctagcaaattccaagagcgacgagag caaatgaaggctgcagaaaaagccgcgcaaaaggcagctgaagacaagaagaatgctacg caagccgagttcaaacgcaagcggcaattggacaaggagaaacgcgagagggagaaggct gctgcggttgccaaagccaaagcggctaggggcatcaccgctgaagctggttctggactg gaaggcttgggagtcctgggcaaagatcaggctgcaaagggcgaaggcttgatgcattca tctgatgagtcctcagacgaagagggagatattgacgaagatctctttggcatcaagaaa gagaaggtcaaggccggacccagaacaaacattgtcaacgaagtcaagattcaaatgccg acgaagaagaagagggcccaacgatctgccaaggacatgcgtgctcggttggcacctgat ctcagtagcttgcaccgcactatcctcagctggaactactttcacgagggtgactttccg ccaaagtcaagaccagagctgtattccaaggttctcaacaccttccgcactcccaacgac taccaaaatactttcgagccacttctaacccttgaagcgtggcaaggctttgtcaaagct cgcgaggagaaccaagccaggccatatgagatacgcatcacgtcgcgagctgctgtcgac atgttccaggagattggtagcaccatgacacatgtcgagaacagggaagttttcatctcc gaaggtgacattattcttttttcgcagtcaaagaatccctcggctgaggagccgacttgc cttgcgagagtgttccgtgtgaagcgaaagcaacaacacattgaagtctcataccgcgtc gtaccaggaaacccgctgaactcggcgctgcagccaaacaatactctgctcggtaccaag ctgcagtctatcactcctctggagcgtgaatatggtgcactcaagggtcttcagtactat gatctatgcgacgagatcattcgggcgaagccgtctcctcttcttacctacaaggatagt cagatccagccgctcatctccaactacaacgtcaacactgcacaagcgaaagccatcaag tcagctattgacaatgatgcattcactttgattcaaggtccccccggttctggaaagacc aaaaccattactgccattgtaggagctatcctcagtgacagccttcgcaatcgtggtacc gctatttctgttcccggccagcagcgatcagaggcagcgtcaaagaagttactggtctgt gcgcctagtaacgcagccgttgatgagttggtgatgcgttttaaggacggaatcaagacg ctgaatggcgagtcgcgcaaagtcaacattgtgcgtttgggacgaggtgatgctatcaag gccagtgtgcaggatgtgacacttgaggagcttgtcaaccagcgattaggtgttgatcca tcggacagcaaagacaaagaggcaacacaaaagctcttccaagatcacaagaaaatctca gatcagctcaagcaagcttaccagcagcgagactctggcgaggtcaagggtgaagctgct gccaagcttgaagaagacattaatgctctgcgcagacaaaagacggctctaggaacaaag attgacaacgtaaaagacgacgagaaacttgccagccgtaatgccgatctcaatcgacga agagctcaagaagcagttttgaacgaggcacacgtcatttgtgcaacgctgagcggatcc ggtcacgaaatgttccagggtttgagcattgagtttgaaaccgtcattgttgacgaagcc gctcagtgtgttgagatgagcgcacttattcccctcaagtacggatgcgccaagtgtatc ttggtcggagatccaaagcagttgcctccaacggttttctctaaagaagcggcgcgcttc cagtacgaacagagtttgttcgttcgtatgcagaagaatcatccaaatgatgtgcatttg ctggacacacagtaccgtatgcatccagaaattagtttgtttcccagtcagaccttttac gatggcaggcttttggatggtggtgacatggctgggcttcgcaagcagccgtggcatcaa agcatggtgcttggaccataccgctttttcgatgtcaaaggtcagcaggcggctgcacca aagggccattcacttatcaacgttgctgaaatcaaagttgcaatgcaactgtataagcga ctgacctccgactaccccgactacgacttcaaaggcaaagtcggcatcattacgccttac aagagtcagttgcgtgagctgaagcagagttttatgcaggtatatggccagagcattatc gaagacattgatttcaacaccacggatgctttccagggtcgtgaaagcgaagtcatcatc ttctcctgcgtacgagcctctcccgcaggtggcattggtttccttcaggatatccgtcgt atgaacgtcggtcttacgcgtgccaaatcatctctctgggttctcggtaactctgaatcg ctccagcgaggacagtattggaacaagctgattgtcaatgccaaagagaggaatcggttt accgatggtgacgttccaaagatgctgaaccagcattcaagcaagttccctgcgccaaag ggaggatacgtgcagcctaaccgaccaacacctgaggtcaaatcagaagtcaagtctgag cccatgagcaggacaggaagcaaccagtccgacagtacatctagctcagacgcaaagcat atcaagcaagaaatcaagcaggaaatcaaacaagaaatcaaagccgagcacaagctcgtc caacacaccaagcgcaaactcgaccaagaacccaacggtgtagacagcctcaaactagaa agcagcgacgttgaaatggacgacatcgcctctgacgctgcttcaaaccccatgaacggc ggcagcggccgctcaaccccagctctcgccgacccatcccgccaaaactccacaacatca acaagtgcagacgcgaccaacggcagcagcagcggcgccacaaacggtagtaccgtcccg cttccaaccgacgtcataggaggcatgtccatggccaaacccaaaattcgacgtcgtccc cgcgaaccagcgaatccgtttatcaagaataagaaaccaaggactggttga

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