Bipolaris oryzae: COCMIDRAFT_92698
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Entry
COCMIDRAFT_92698 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K03267
peptide chain release factor subunit 3
Organism
bor
Bipolaris oryzae
Pathway
bor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCMIDRAFT_92698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_92698
03012 Translation factors [BR:
bor03012
]
COCMIDRAFT_92698
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
COCMIDRAFT_92698
Translation factors [BR:
bor03012
]
Eukaryotic type
Release factors
COCMIDRAFT_92698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
19128124
NCBI-ProteinID:
XP_007686992
JGI:
Cocmi1_92698
UniProt:
W6Z425
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MADNWEQEEERLSQQAQGMNLNNAPTFTPGAQSFQPGASSFVPGQPYGGYQGGYNQYGQQ
YGGYNQYANQGQYYQQQQGYPQYGQQYGQQQGYPNYGQYQGQQNFQPQQQQQQGQGQAPE
APKAKVLSIGGDSAPKAKVLSIGGDTTTPKVEKTGGTKVLSLGTPGAPSAAKEKADKEKG
TIDAGTKVTAAKAIEKTGEPTPASAGSGRTSPTPSSGRNSPTPKEKAPERPMAKQPDIEN
EIADIDEATLAEIYGKEHVNIIFLGHVDAGKSTLGGSILISTGMVDERTLDKYKKEAKDA
GRETWYISWALDLNKEERAQGKTIEVGRGFFETEKRRYSILDAPGHKTYVPNMISGASQA
DVGILVISARKGEYETGFEKGGQTREHAMLAKTQGVNKILIVVNKMDDPTVEWSEDRFKE
CTTKVIAFLKGLGYNPKTDISMMPVSAQTFTGIKTRVPKDLAPWYDGPSLLEYLDNMQAL
ERKLNAPFMMPIAAKYKDMGTMIEGKIESGIIKKENKYLMMPNRQTIHISALFGEQEDEI
PGAACGDQIRVRIRGVEEEDILPGYVLCSPKRPVHCVSQFEAQVVLLDIKSIVTAGFNCV
LHVHAAQEEVTISALLHKLEKGTGRRSKKAPGFATKGMSIIARLQITGTAGSICVERFED
YPQLGRFTLRDQGQTIAIGKITKLITDPEA
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaactgggagcaagaggaggagcgcctctcgcagcaggcgcagggcatgaac
ctcaacaatgcgcccaccttcactcccggagcgcagtcattccagcccggcgcgagctca
ttcgtgcctggccagccctacggaggttaccagggcggctacaatcaatacggccagcag
tatggtggatacaaccagtacgcaaaccagggccagtactatcagcagcaacaaggatac
ccccaatatggccaacaatatggccagcagcagggctatcccaactacggccagtaccag
ggccagcagaacttccagccccagcagcagcagcaacaaggtcaaggccaggctcctgag
gcacccaaggccaaggtcctgtccattggcggcgacagtgcacccaaggctaaagttctc
tctatcggtggcgacactactactccaaaggttgaaaagacaggcggaaccaaggtcctc
agcctcggaacaccaggtgctccatccgctgccaaggaaaaggccgacaaggagaaggga
accattgatgccggaaccaaggtgactgctgcaaaggcgattgagaagactggagaacct
accccagcttctgcaggctctggccgtacttcgccaaccccctcgtcgggtcgcaacagc
ccaactcccaaagagaaggcccccgaaaggcctatggccaagcaaccagacattgagaac
gaaatcgccgacattgacgaggcgactcttgccgaaatctacggcaaggagcacgtcaac
atcatcttcttgggccacgttgacgcaggaaagtctaccttgggtggcagtatcctcatt
tccactggcatggttgatgagcgaacccttgacaagtacaagaaggaggcaaaggacgct
ggtcgagaaacatggtacatttcatgggcgctcgatttgaacaaggaggagcgtgcgcag
ggtaagactatcgaggttggtcgaggtttctttgagacagagaagcgacgatactcgatc
ctcgatgcccccggccacaagacctatgtccccaacatgatcagtggtgcttcgcaagca
gatgtcggtattcttgtcatctctgctcgaaagggagagtacgagactggtttcgaaaag
ggtggacaaacccgagagcacgctatgttggccaagacgcagggtgtgaacaagattctc
atcgtcgtaaacaagatggacgatcctactgtcgaatggtcagaggatcgattcaaggag
tgcacaaccaaggtcatagccttcttgaagggtctcggatacaaccccaagacagacatt
agcatgatgcctgtcagcgcccagacctttactggaatcaagacccgtgtgcccaaggac
cttgcaccctggtatgatggaccatctcttcttgagtacctagacaacatgcaagctctt
gagcgcaagctcaatgctcccttcatgatgcccatcgccgcaaagtacaaggacatgggc
accatgatcgaaggaaagattgaatccggtatcatcaagaaggagaacaagtacctcatg
atgcctaaccgacaaaccattcacatctctgccctgttcggtgagcaggaagacgaaatc
cctggcgcagcttgcggtgaccaaattcgtgtacgaatccgaggtgtggaagaagaagat
atcttgcccggttacgtgctgtgttcacctaagcgacctgttcactgcgtctcccaattt
gaggcccaggtcgtgcttctggacatcaagtctattgtgactgctggtttcaactgcgtg
cttcacgtccacgcagcacaagaagaagttaccattagcgcactactgcacaagctcgag
aagggtaccggaagacgatcaaagaaagcacctggatttgcgacaaagggcatgagcatt
attgcacgattgcagattaccggtacggctggaagcatttgtgttgagcgtttcgaagac
taccctcagcttggtcgtttcactctccgtgaccagggtcaaacgattgccattggaaag
attaccaagctcatcaccgaccccgaagcttaa
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integrated database retrieval system
