Bipolaris oryzae: COCMIDRAFT_92741
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Entry
COCMIDRAFT_92741 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K18723
nucleoporin GLE1
Organism
bor
Bipolaris oryzae
Pathway
bor03013
Nucleocytoplasmic transport
bor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCMIDRAFT_92741
03015 mRNA surveillance pathway
COCMIDRAFT_92741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_92741
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCMIDRAFT_92741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
19128133
NCBI-ProteinID:
XP_007687049
JGI:
Cocmi1_92741
UniProt:
W6Z9G2
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MPARSGTSSSSMHTATSFGSSFLDASPTRLSPNRSSLRPHRESLVRDPYESPNRKLALEF
NLRLSISDSQFNEKLDQDAAERAKRHAEQLAYAAEEHERVFRTAKLEIERLALEEEQARL
RHEENQRREIERLREQKAREEELAHRRALEAKQREEEAARQAAEHQKKLQEAEARIKAQR
EQEAAAERQQKEKAEADRKAAETAAATAAAAERARQQAPQQPAPQPAAAAPAQVAAPKPA
TSAPAPAGNFEQLHNQYIQLHQRMKEFRKTFWEEHKKPSSPLKGPVGDARRALRTRLGQI
NVERKDSAAAIKRLRTECFDVALATSGPMIDIRPYIVSHQIPQLANENDAAYPAFLLYVW
ICFEKFLVKQFEKEAANTDGRIIQEIGLIAASLFGDQKYMWNGLPLTDIALAKFHKACPP
LFGIRGTMDTKEGRLRLGWRPDSTPESYSQRMRGIGAGYASMSLRSFASKTPAIATSEYW
RAIVSICNTPPDQLWPGHFAILSGLIRDYYKKFIQFYGVPARAVLRRAVIDLPARAPPRC
KDAASTIAVLHENWKRENLSLE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccagatcgggtacatcgtcctccagcatgcatactgcgacttcgttcggctcg
agtttcctggatgcttctccgacacgcctatcgccgaaccgaagcagcctgcgccctcac
cgcgagtcccttgttcgtgacccctatgaaagtccgaaccggaaactcgcgctggagttt
aatctccgactcagcatttccgacagccaattcaatgaaaagctggatcaagacgcagcc
gagcgggcaaagcgacatgccgaacaactggcctacgcggccgaggaacacgagcgcgtc
tttcgcaccgcaaagctagagattgagcgactggccttggaagaggaacaggctcgtctc
cgccacgaggaaaaccagcgcagggagattgagcggctgcgcgaacaaaaggctcgcgag
gaggaactagcgcaccggagagctctcgaagcaaagcagcgcgaagaggaagccgcccgc
caggctgctgagcaccaaaagaagcttcaggaggcagaggcaaggatcaaggctcagcgg
gaacaggaggctgcagccgaaaggcagcaaaaagaaaaagcagaggccgatcgaaaagct
gccgagaccgccgctgctactgctgctgctgctgagagagctcgccagcaagctccacaa
caaccagcaccacagcctgccgctgccgcacctgcccaagtagctgcgcccaagccggcg
accagtgcaccagcgccagccggcaattttgagcaattacacaatcaatacatccagctc
caccagcgcatgaaggagttccgcaagacattctgggaagaacataaaaaaccatcctcg
cccctcaagggtccagttggtgacgctcggcgcgccctccgcactcgacttggtcagatc
aacgttgagcgcaaagacagcgccgctgccatcaagcggctccgaacagagtgctttgac
gtcgccttggcaacatcagggcccatgattgatatccgcccatatatcgtttcgcatcag
atcccgcaactagccaacgaaaacgacgccgcataccctgctttcctgctttacgtctgg
atctgctttgaaaagttccttgtcaaacaattcgaaaaggaggcagcaaacacagacggt
cgcatcatccaagagattggcctgattgcagccagtctgtttggtgatcaaaagtacatg
tggaacggccttccactcaccgacatcgccctggccaagttccacaaggcctgcccacct
ctattcggcattcgtggtaccatggatacaaaggaaggccgattacgattaggatggaga
ccagactcgaccccagaatcctactctcagcgtatgcgtggtatcggcgccggctatgct
tccatgtctctccgctcattcgcatccaagacccctgcgatagcaacatcagagtactgg
agagccattgtctcaatctgcaacaccccgcccgaccaactctggcctggccacttcgcc
atcctcagcggcctgatccgcgactactacaaaaagttcatccaattctacggtgtccct
gctcgcgcagtgctacgtcgcgctgtcattgacctccccgcccgtgcgcccccgcgttgc
aaagacgccgctagcaccattgctgtactacacgaaaactggaagagagaaaacctttcg
cttgagtag
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integrated database retrieval system