Bipolaris oryzae: COCMIDRAFT_9281
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Entry
COCMIDRAFT_9281 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
bor
Bipolaris oryzae
Pathway
bor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCMIDRAFT_9281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_9281
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCMIDRAFT_9281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
19128150
NCBI-ProteinID:
XP_007692547
JGI:
Cocmi1_9281
UniProt:
W6YNK3
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MNGTPARRGVGGFPQTPHNNANANRSPGLQSPEASSPRPNIRSPLPDLPKAPPQPTSGPL
IPSDILDPAQQRFYVFAVYVALWAYRSYDFYTLALEDDESLWLCLKWCFFDVLFMFGVPL
LEIPWLEWGNGAAFLLFVMHAGIDVMLMFRIGIPVQAWFMGLIGFLWDSELAISERSVKP
GAIIHNASLILGKQIVNILPEGSAILNPERQSFCLSSTISQLDIPIRINQTEPHEMELLR
IDIDTNMNETITVKKSELKGMMKKARKAVKNANPDDPLTLTYTIKKPGVYLLKKVTDQSK
LQVRPRSTNAVVTTCPQARVKPTGNNRCRSDLSNVSLEVEGTPPLSVKYRLTVNGKARGG
SQFQNLQPEDVISPLSRHTSQALVKNGREDISWARSQKVLVPLNETITNSGSWEYEIEEV
QDGLGNFVSYVNVDDEDRPKPKVAGIRQMFEVHERPTAFLKGCSPQNPLRVPKGNAARLP
VHYASTGKNPIDTAHTVEYLFTPQENIIADGYHSPDAVLQKQVMRKGEQPTISAAGLYTI
KSVASEFCDGEVFEPTSCLLQNPPEPDMTLDSEDIIDKCAGNPIGLRVGLDFVGSPPFTL
TYYEKKDNGREVRKTPLQIASLRSTIDLTPQDAGHYEYIFKTISDSVYPERPLNNIRLQQ
DVKPSAQAHFIESRRPKQACIDDIAEFDVGFVGEAPWKLEYEIVHNGKRTRRSIETENAH
YTIRTDKLSSGGEYVVALTSVTDKAKCKEVLKEEARVNVRHERPKAYFGHIEGKQSVLAL
ESRQVGLPLRFTGNGPWSLKYENLKTKEVKRESFQNPNSWLDVKTDGTYQLVSVRDSICP
GLIDESADQFHVSWVARPSLSVPEKSAVLDGSKYIKEPVCEGDEDAFDVSLTGNPPFDIS
YRQEYKDKKGKTASVSEKDLHTAGGFASIRSETSKAGTYEYTFLKLADSRYDHSKKHFSP
VTIQQTVHSRPSARFDKPGKTYSYCSRESEGEEVIPITLEGVAPFYLEVEIKHQGTPKPE
ISIHKNIPTNKYDLKIEHRKMHLGHSSISIRKVRDSRGCTLKPPPGGPRVQISVHDAPTA
TPLEDRQDFCVGERLSFALGGQSPFTVFYTFEKQERKASNPGTTFRRLAELPGTFTITGL
RDSASECLASLDLTKTIHPIPSVRLSGGQVTEVDIHEGGGTDLEFQFWGTPPFEFTYTRS
TNANKGRKSKVLEIRTEVSHEMTMSIPVQEEGTYEVVSIKDRWCSFARPGEGVDGKSGGQ
KMLTY
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcacaccagcccggcgaggcgtgggtggcttcccacagacaccacacaacaac
gccaacgccaacaggtctcctggcctgcaaagcccagaagcatcctccccacggccaaac
attcgatcaccgcttcccgatctcccaaaagcccctccacagccgacctcagggcccctc
ataccctcggacattctcgatcccgctcagcagcgcttctatgtattcgctgtctatgtc
gccctatgggcataccgatcatatgacttctatacgctagcgctcgaggacgacgagtcg
ctgtggctgtgtctgaaatggtgcttctttgacgtgctattcatgttcggcgtaccgctg
ctcgagattccctggctggaatggggcaatggcgctgcttttctcctattcgtaatgcat
gctggaatcgacgtcatgctcatgttcagaattggcatacccgtacaagcttggttcatg
ggattgattggtttcctatgggatagcgaactggccattagcgaacggagcgtcaagcct
ggtgcaattatacacaatgcctccctgattctcggaaagcagattgtcaacatcttgccc
gagggatctgccattctaaacccggaaaggcagtctttctgtctcagctcaaccatctct
caactcgacattcccatcaggatcaaccagaccgagcctcacgagatggaactcttgcgc
attgacatcgacaccaacatgaacgagactatcacagtcaaaaagagcgagctgaaggga
atgatgaagaaggcacgaaaggcggtcaagaacgccaaccccgacgacccgctcacattg
acctacaccatcaagaagccaggcgtatatcttttgaagaaggttacagatcagtcgaag
ctccaggtgcgaccgcgctcaaccaatgctgtggtgactacctgcccgcaagctcgagtc
aaaccgactggtaacaacagatgccgaagcgatctatccaatgtttcgctagaagtcgag
ggcactccgccgcttagcgtcaagtaccgcctgacagtaaacggaaaagctcgaggcgga
tcccagtttcagaacttgcagccagaggacgttatttcgcctctgtctaggcacacatca
caagcattggttaagaacggacgcgaagatatttcctgggctcgctcgcaaaaggttctg
gtacccttgaacgaaaccattacgaacagcggttcttgggagtacgagattgaagaggta
caggatggattgggcaactttgtcagctacgtgaatgttgatgatgaagatcgaccgaaa
cccaaggttgcaggcattcgtcaaatgttcgaggttcacgagcgacctacggctttcctc
aagggatgtagcccacagaatcctctccgcgtgcccaagggcaacgccgcccgcctaccg
gtccattacgcttcgacgggcaagaatcctattgacactgcacacacggtcgagtatctt
ttcacgcctcaagagaacatcatcgcagatggctatcatagcccagatgctgttctgcaa
aagcaagtcatgcgaaagggagagcagcccaccatctcagcagcaggtctatatacaatc
aagtctgtagcatccgagttctgcgacggcgaagtctttgagcctacctcttgtctgctc
caaaacccacctgaaccagatatgacattggacagcgaagacattatcgacaagtgcgct
ggcaacccaattggtctccgtgttggtctcgatttcgtgggaagcccgccttttacactc
acctactacgaaaagaaggacaacggaagagaggtcagaaagacacctttgcagattgcc
agtcttcgcagcacaatcgatctcaccccacaagatgccggtcactacgagtacatcttc
aagactattagtgactctgtctacccagagaggccgctcaacaacattagacttcagcaa
gatgtgaaaccatctgcacaagcacactttattgagagcagaaggcctaagcaggcttgt
atcgacgatattgcggaattcgacgttggcttcgttggagaggcaccctggaaactggaa
tacgagattgttcacaacggcaaacgtacaaggcgctctatcgaaaccgaaaacgcacac
tacactattcgaaccgacaagcttagcagtggtggagagtacgttgtggcattgaccagt
gttaccgataaagccaaatgcaaagaagtcctcaaggaagaagctagggttaatgtacga
cacgaacgacccaaggcttacttcggtcacattgagggcaagcagtcggtactggcactg
gaaagccgacaggttggattgccgcttcgctttactggaaacggtccttggtcgctcaag
tatgagaacttgaagaccaaagaagtcaaacgagagtctttccagaatcccaactcgtgg
cttgatgtcaagaccgacggcacatatcaacttgtctcagtcagagactctatctgtcca
ggcctgattgatgagtcggcggatcaattccatgtttcttgggtggctcgaccctcgctc
agtgttcccgaaaagagcgccgttcttgacggaagcaagtacatcaaagagcctgtttgt
gaaggcgatgaggatgcatttgatgtctctctgactggtaaccctccatttgacatttct
taccgacaggagtacaaggacaagaagggtaaaacagcttctgttagtgagaaggatctt
cacactgcaggtggcttcgcttctatacggtcggaaacctcaaaggctggtacttacgag
tacactttcttgaaacttgccgactctcggtatgaccattcgaagaagcatttctcgccc
gttactatccagcaaactgtccactcacggcccagtgctcgtttcgataagcctggaaag
acgtacagttactgctcccgggagtcagagggagaagaggtcattcccattactctggag
ggcgtcgcacccttctacctcgaggttgagatcaagcaccagggtacacccaaaccggag
attagcatccacaagaacattcctacgaacaagtacgatctcaagattgagcaccgcaag
atgcatctaggccactcatccatctccatccgtaaggttcgcgactcgcgcggatgtacc
ctcaagcccccaccaggcggtccccgtgtccagatcagcgtgcacgatgccccaaccgcc
acacctctggaagaccgccaggacttctgcgttggcgagcgcctctcgttcgcccttggc
ggtcaatctccctttaccgtcttctacacattcgagaagcaagagcgcaaggcatccaac
ccaggcaccactttccgccgtctggccgagctccccggaaccttcaccatcaccggtctc
cgcgactctgcatcagaatgcctcgctagtctggacctcacaaaaaccatccaccccatc
ccctctgtgcgcctctccggcggccaagtcaccgaagtcgacatccacgagggcggcggc
accgatctcgaattccagttctggggcaccccgccctttgaattcacatatacccgtagt
accaatgccaacaaagggagaaagagcaaggtgctggagattcgcacagaggttagccac
gaaatgacgatgagtatccctgtccaagaagagggtacgtatgaggttgtttcgatcaag
gatcgctggtgtagttttgctaggccgggcgagggcgtggacgggaagagtgggggacag
aagatgttgacgtattga
DBGET
integrated database retrieval system
