Bipolaris oryzae: COCMIDRAFT_93118
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Entry
COCMIDRAFT_93118 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bor
Bipolaris oryzae
Pathway
bor03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCMIDRAFT_93118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_93118
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_93118
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
COCMIDRAFT_93118
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
COCMIDRAFT_93118
PBAF complex
COCMIDRAFT_93118
GBAF(ncBAF) complex
COCMIDRAFT_93118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
19128207
NCBI-ProteinID:
XP_007687164
JGI:
Cocmi1_93118
UniProt:
W6ZFK5
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MADDATTGASAQDPTLSGEGAADTNALDQDTNMLEDTAVKASSNEPATATPAAASDNPLD
APDAPRPEAEDADGQEDEEMGGTDDAKKEGEGAEAADPEAQAKADLQSAARSHFVTQTYA
TIIPSYATWFDMRYIDYRERKALPEFFNNRNRSKTPAVYRDYRDFMINTYRLNPSEYLTV
TACRRNLAGDVCAIMRVHAFLEQWGLINYQERPSNIGPPFTGHFRVTVDTPRGLQPFQPG
PGSKVTEGKQLAATDRAASQQPLAKSETKSLAGRNIYEPNGKEASVEPKAANGEAAANGG
SVDVKDLEAAAKEPTKVINCFSCGVECTRVHFHETKPSEQPGQLKAAGGLKRDLCPRCFV
EGNFPSGTSSADFTKISNPEDLAATETEEKWTEEETLLLLEGLEEFDDDWNRVADHVQTK
TREQCVMKFLQLEIEDKYVEADLPESQSAAPSTKFLRDLEYLSEGRVPIHHADNPILSVV
SFLAGLAPANVTEAAVASGRSVNEMKRILQEKINKAPTAPSEKGKEKEGEQSTPAASASD
MKPEGGDAMDIDTSAESTTVATKEADTSSGANPLTTLPFALSAARSSALASHEERHITRL
VSGAVNLQLQKLQLKLAHFNDFEKLLSAERRDLQRRRQQLFMDRLNFQRRVRALEDATKK
ISSSMGGQGLPGSMSNEDAVQALTEAIRMFGVGKGEDSMGVKRDSVDAGVVMPVAEGAEG
YGKIEI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacgcaacaacaggcgcatccgcccaggaccccaccctttccggagaaggc
gccgcagacaccaatgcgcttgatcaagacacaaacatgctcgaagacactgccgtcaag
gcgtcgtcaaatgagcccgcgactgcaacacctgctgccgcatccgacaaccctctagac
gcacccgacgcaccacggccggaagccgaagatgcggatggtcaagaggacgaagaaatg
ggcggcaccgacgatgcaaagaaggagggcgaaggcgccgaagctgcggatcccgaagca
caagcaaaggccgatttgcaatcggcagcacgctcccattttgtcacgcagacttatgcg
accatcatcccaagctacgcgacttggtttgacatgcgctacattgactaccgtgagcgc
aaggccctgccagagttcttcaacaaccgtaaccgcagcaagaccccggccgtttaccgc
gactaccgtgatttcatgatcaacacataccggctcaacccatccgagtacctcacagtc
accgcatgccgaaggaatcttgctggagacgtgtgcgcaatcatgcgcgtacacgccttc
ctcgaacagtggggtttaatcaattatcaggaacgcccatcgaacattggcccacccttc
actggccatttccgtgtcacagtcgacaccccccgtgggctccagcccttccaaccagga
ccaggctcaaaagtgacggagggcaagcaacttgcagcgactgaccgcgccgcgagccaa
caaccccttgcaaagagcgagaccaagtctctagcaggtcgaaacatctacgagcccaat
ggcaaggaggcttccgtggaacccaaggctgcaaacggagaagcggctgcaaatggcgga
tcagtcgacgtcaaggacctcgaggctgccgctaaagagccaactaaggttatcaactgc
ttcagctgcggtgtcgaatgcacacgcgtacatttccacgagacgaagccctctgagcag
ccagggcagctcaaggctgctggaggtctaaagcgggatctgtgccccaggtgtttcgta
gagggcaacttcccatccggcacatcatcagcagacttcaccaagatctcgaatccagag
gatttggcagccaccgagaccgaggagaagtggaccgaagaagaaaccctcctactactt
gagggtttggaggagttcgatgacgattggaatcgcgttgcagaccacgttcaaacaaag
actcgcgagcagtgtgtgatgaaattcctgcagctcgagattgaggacaagtacgtcgag
gcagatctaccagagtcacaatctgctgctccttcaaccaaattcctacgcgatctcgag
tacctcagcgaaggccgcgtcccaattcaccatgcagacaatccgatactgagcgtagtc
agcttcttggctggtctggcacctgcaaacgtcaccgaggccgcagtcgcttcagggcgc
agtgtgaacgagatgaagcgcatcttgcaggagaagatcaacaaggccccaacagccccc
tcagaaaagggcaaggaaaaggaaggcgaacagtccacacctgcagcctcagcttcagac
atgaagccagagggcggagacgccatggacattgacacgtccgctgaatccaccacagta
gccacaaaagaagcagacacctcctcaggcgccaatcccctcaccaccctcccctttgcc
ctctccgccgcgcgctcctcagcgctcgcctcgcacgaagagcgccacatcacgcgcctc
gtctcgggcgccgtcaacctgcaactccaaaagctgcagctcaaactcgcccacttcaac
gacttcgagaagctgctctccgctgagcgtcgcgacctccagcgccgccgccaacaactc
ttcatggaccgcctcaactttcaacgccgtgtccgcgccctcgaagacgccaccaagaaa
atcagctcctcgatgggcggacagggcctgcccggtagcatgagcaacgaggacgccgtg
caggcgcttacagaggctattcgcatgtttggtgttggaaagggtgaggatagcatgggg
gtgaagcgggatagcgttgatgcgggggttgtcatgccggttgctgagggcgcggagggg
tatggtaagatagagatttag
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integrated database retrieval system
