Bipolaris oryzae: COCMIDRAFT_93178
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Entry
COCMIDRAFT_93178 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bor04131
]
COCMIDRAFT_93178
04121 Ubiquitin system [BR:
bor04121
]
COCMIDRAFT_93178
Enzymes [BR:
bor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
COCMIDRAFT_93178
Membrane trafficking [BR:
bor04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
COCMIDRAFT_93178
Ubiquitin system [BR:
bor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
COCMIDRAFT_93178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis1_TPR_C
Fis1_TPR_N
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
Zn_ribbon_19
zf-RING_5
zf-rbx1
zf-RING_UBOX
TPR_2
TPR_CcmH_CycH
HypA
VPS18_RING_C
DUF1272
ARM_TT21_N
Zn_ribbon_IFT122_C
zf-RING_Vps41
DUF7385
zf-C3HC4_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
19128217
NCBI-ProteinID:
XP_007687189
JGI:
Cocmi1_93178
UniProt:
W6Z987
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MPPSLPYAADVESPLKPEELQVLRAQYEKEGEYVGLQTKFNYAWGLIKSTSRPDQQEGVR
LLSEIFRNSRERRRECLYYLALGNYKLGNYAEARRYNELLLELEPANLQAGSLKSLIDEK
VAKEGLLPTDICASLPLERCFLAGLPAPNFRLRPTTLYITLRDTHAIMNQSSGENVQSQA
QRPGHRDMMFCHECADEWYRDEHGLSCPECGSDFTEIIEENNDPRDSNMFGHDGDESDSI
PGFGQGQPRNPQHGSSQNDDPEEDDISNFRFVQTAPGRYNLQATVTRSVSPHGGMPPGSI
GGFMAMLNGLTGAGLRPQGQQGQQQTPGQGQGEGLFSGSGTNQNRSAFHESQNDGTEGGP
QIRGGRFTYHGGVRLFPPGGNGAGRAEPVDELTNVMTGLFAAFGAPPGHVHTHGFPQGGA
QGTFSGEHAHGPGERVMGNPILNLFSAMGMMVPGAGNMGDFVYSQEGLDRIVSQLMEQTA
TSNAPGPATQADIDALPRKEVTEEMLGEEHKAECSICMDEVNIGEQVTMLPCKHWFHHPC
ISAWLLEHDTCPHCRKGITKGGQDQSGNPASSGAHDDPTSQMPGAFTAGPQSSNQGNSSN
TGDAGSGNGGISDRIRRGLFGSPH
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgtcattaccgtatgctgccgacgtagagtcgccccttaagcctgaagagctg
caagtccttcgcgcacagtacgaaaaagagggcgaatatgttggattgcagacaaagttc
aactacgcatggggcttgatcaagtcaacctctcgtcccgaccaacaagagggcgtgcgc
ttgctctctgagatctttcgcaactcgcgcgagcgtcggcgcgaatgcctctactacctc
gctctgggcaactacaagctcggcaattacgctgaggcccgacgatacaacgagctcttg
ctggagctggagcctgcaaacttgcaggctgggagcctgaagagtctcatcgacgagaaa
gttgcgaaggaagggcttcttccgaccgacatttgtgcctctctgccactagagcgttgc
ttcctggctggattacctgcaccaaactttcgactacgccctaccaccctatatattacc
ctacgcgacacgcacgctatcatgaaccagtcaagtggtgagaatgtgcaatcacaagcc
cagcggcccggccaccgcgacatgatgttttgtcacgagtgtgccgatgaatggtaccgg
gatgaacatggtctgtcatgcccagaatgcggctcagacttcacagagatcattgaagag
aacaatgacccccgagacagtaacatgtttggacacgacggcgacgagtccgactctata
cctggttttggacaaggccaacctcgcaatccgcaacatggttcgtcgcagaatgacgat
ccagaggaggacgacattagcaattttcgattcgtacagactgcccccggacgctacaac
ctacaagctactgtcaccagatccgtgtctccccacggaggcatgccaccaggatccata
ggcggcttcatggccatgctgaacggcttgactggcgccggcctacggccgcagggtcag
caaggccagcaacagactccggggcaaggccagggtgagggcctcttttccggctcgggg
accaatcagaatcggtctgccttccacgaatcacagaatgacggtacagaaggaggccct
cagatccggggaggaagattcacatatcacggcggagttcgtctctttcctcccggtgga
aacggcgctggacgggccgagcctgtggacgagctaacaaacgttatgacagggctcttt
gccgcgtttggtgcccctcctggccatgttcacacccatggctttcctcaaggcggagcc
cagggcacttttagtggagagcacgctcatggccctggagaacgggtcatgggcaacccc
atcctcaacttgttctctgcaatgggcatgatggttcctggagctggcaacatgggagac
tttgtgtattcacaagaaggtctcgatcgcatcgtctctcagctcatggaacagacggca
accagcaatgcacccggccccgccactcaggctgatatcgacgccctgccccggaaagaa
gttaccgaagagatgctaggcgaggagcacaaggctgaatgcagcatatgcatggacgag
gtcaatatcggcgaacaggtgacaatgctgccgtgcaagcattggttccatcacccatgc
atatcggcatggctgctagagcacgatacctgcccgcattgccgaaagggcattaccaag
ggtggtcaggaccagtctggcaaccctgcttcatcaggcgctcacgatgatcccacgtcc
cagatgcctggtgcgttcactgcgggtccacaatcctctaaccagggcaactcgtctaat
accggagatgcaggctcgggcaatggtggcatcagcgaccggatacgaaggggtctgttt
ggatctccacattag
DBGET
integrated database retrieval system
