Bipolaris oryzae: COCMIDRAFT_93364
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Entry
COCMIDRAFT_93364 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bor03016
]
COCMIDRAFT_93364
Enzymes [BR:
bor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
COCMIDRAFT_93364
Transfer RNA biogenesis [BR:
bor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COCMIDRAFT_93364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
19128256
NCBI-ProteinID:
XP_007687251
JGI:
Cocmi1_93364
UniProt:
W6Z938
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MALVPSPPRDKYPPLPDDKFPWKEPPPVAITPCDPWPPPYYLEDGLRKVTPYHYTYNTYC
KQRWRGREILDIFASEFRDRPAEYYEQAIIDGRVVVNGKPVPSTKTIINNGDVISHTLHR
HEPPCTAQPIGIVHEDNDMIVINKPAGMPVHPAGRYNFNSIIEIMRADRGYGWNPLPCNR
LDRLTSGIMFIGKHKQAAEDLSAQIRGRTVKKEYITRVVGEFPEGEILCEKPILQISPKL
GLNRVRANGKEAKTVFKRLAYYPPKDDGNGTQEQEGEKGPDGQPWKKLRGYSIVRCFPVT
GRTHQLRVHLQFLGHPISNDPIYANQRVFGPSLGRGQSEDEDDEDIMSRLSRMGKEEVAD
AVAYHDEMVDAYNKRKAERMTGEKCKVCDTDLYSDPGVHELGIYLHARRYRCEEGKWDYQ
TGLPDWALPPPGYEGPTEGTEESDPLAVDLKKLGLEDEESQEKVETS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgtgccttctcctccgcgcgacaaatatccgcctctgcccgacgacaagttt
ccgtggaaagagccaccgcctgtggccattacgccttgcgatccctggccgccgccatac
tacctcgaggatggcctgcgcaaggtgacgccttaccactacacatacaatacctactgc
aaacagcgatggcggggccgcgaaattctcgacatattcgcgagcgagtttcgcgacaga
cctgccgagtactatgaacaagccatcatcgacggccgcgtcgttgtcaacggcaagccc
gtgcccagcacgaagacaatcatcaacaatggcgatgtcatctcccacacgctgcaccgc
catgagccgccctgcactgcccagcccataggcatcgttcacgaggacaatgacatgatt
gtcatcaacaagcccgcgggcatgccagtccaccccgccggtcgctacaacttcaattcg
atcatcgagatcatgcgcgccgatcggggatatggttggaatcccctaccctgcaacaga
ctggaccgcctaactagtggtatcatgttcattggaaaacacaagcaggctgcagaggac
ttgagcgcgcagatacgaggaaggactgtcaaaaaggagtatatcacaagggttgttggc
gagtttccagagggcgagattctctgtgagaagcccatacttcagattagtcccaagctg
ggtctcaatcgcgttcgcgccaatggcaaggaagcaaagaccgtcttcaagcgacttgca
tactacccgccaaaagacgatggaaatggcactcaagagcaggaaggcgagaaagggcct
gatggtcagccatggaagaaactccgaggctactccatcgtacgctgcttccctgtgacg
ggccggacccaccagctgcgcgtccacctccaatttctcgggcatcccatttccaatgat
cccatatacgccaaccagcgcgtgtttggaccttctcttggccgtgggcaatctgaagac
gaagacgacgaagacatcatgtcacgtctctcgcgcatgggcaaggaagaagtggccgat
gcagttgcgtaccacgacgaaatggtcgatgcgtacaacaagcgcaaggccgaacgcatg
acgggagaaaagtgcaaagtctgcgacacggatctgtacagtgacccaggcgtgcatgag
ctcggcatctatctccacgctaggagatatcgatgtgaggaaggaaagtgggactatcag
actggattgcctgattgggcacttccaccgcctggctatgaaggccctactgagggtact
gaagagagtgaccccttggctgttgatttgaagaagctggggttggaggatgaggagtct
caagaaaaagttgagacttcatag
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integrated database retrieval system