Bipolaris oryzae: COCMIDRAFT_94723
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Entry
COCMIDRAFT_94723 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_94723
03041 Spliceosome [BR:
bor03041
]
COCMIDRAFT_94723
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_94723
Enzymes [BR:
bor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCMIDRAFT_94723
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
COCMIDRAFT_94723
mRNA cycle factors
Common to processing body (P body) and stress granule
COCMIDRAFT_94723
Spliceosome [BR:
bor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
COCMIDRAFT_94723
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
COCMIDRAFT_94723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
19128507
NCBI-ProteinID:
XP_007687731
JGI:
Cocmi1_94723
UniProt:
W6Z6Z3
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MAEQLDMGRLNINDSQHNPQNGFSGERSAYIPPHLRGRPQGGPGGPAPMDGPPMMNGGPP
MNGNNGGGGGWANAPNFTPRGPPGGGWGGGGQRGGFESNGYGKSGGGGGNARGSGDGAWK
DGKHVPGPPNPRLERDLFGVPNDPSKQHTGINFEKYDDIPVEASGQGVPEPVTRFTNPPL
DDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILAQAFQNGP
APPPPSAQGGYGRQRKAYPTSLVLAPTRELVSQIFDEARKFAYRSWVRPCVVYGGADIGS
QLRQIERGCDLLVATPGRLVDLIERGRISLASIKYLVLDEADRMLDMGFEPQIRRIVEGE
DMPPTAGRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKIEYVEDADKR
SVLLDILHTHGVGLSLIFVETKRMADSLSDFLINQGFPATSIHGDRTQREREKALEMFRS
GRCPLLVATAVAARGLDIPNVKHVVNYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGN
RGVVRDLIELLKEANQEVPSFLESIAREGSGFGGGRGGRGGGRGRGNAATRDVRRMGGGG
GFGGGGGNGGSWGGSQGYGGGGYGGAPGGGYAAPAPAYGGGGGYGGGGYGNPSGPGGNSW
W
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaactcgacatgggtcgtctcaacatcaacgactcccagcacaacccccag
aacggcttcagcggcgagcgttctgcatacatcccccctcaccttcgcggccgccctcag
ggaggccctggaggccctgcacctatggatggcccgcccatgatgaacggcggtcctcct
atgaacggcaacaacggtggcggtggcggctgggccaatgcccctaacttcactcctcgc
ggtccccctggtggtggatggggaggcggcggtcaacgcggcggcttcgaatctaatggc
tacggaaagtctggtggcggtggtggcaacgctcgtggatctggtgatggcgcctggaaa
gatggcaagcacgttcccggcccgcctaacccgcgtctcgagcgtgacctcttcggtgtc
cccaacgacccatcgaagcagcacactggtatcaacttcgagaagtacgacgacattccc
gttgaggcttccggtcagggtgttcccgagcccgtcacacgcttcacgaacccgcctctc
gatgaccacctgctgagcaacatcgagctctccggatacaaggttcccactccagtacag
aagtactccattcccattgtcatgggcggccgtgatctcatggcttgtgcccagactggt
tctggaaagactggtggtttcctctttcccattcttgctcaggccttccaaaacggaccc
gctcctcctccaccttcagcacagggcggctacggccgtcaacgcaaggcttaccccaca
tcccttgtcctcgcccccactcgtgagctggtctcccagatcttcgacgaggctcgcaag
tttgcctaccgttcttgggttcgtccctgtgtcgtgtacggaggtgccgacattggctcc
cagctccgccagattgagcgcggctgtgatttgcttgttgccacccccggtcgtttggtc
gacttgatcgagcgcggccgcatctcacttgctagcatcaagtaccttgttctcgacgag
gctgaccgcatgttggacatgggtttcgagcctcagattcgccgcattgttgagggtgag
gacatgcctcccaccgctggccgccagacactcatgttttcggccaccttccctcgcgac
atccagatgctcgcccgtgacttcctgaaggactatatcttcctttcagtcggtcgtgtt
ggttccacttctgagaacattacccagaagattgagtatgtcgaggacgctgacaagcgc
tccgttctcctggacattctccacacccacggtgttggtcttagcttgatcttcgtcgag
accaagcgcatggccgactcactgtccgacttcctcatcaaccaaggtttccccgccaca
tctattcacggtgaccgcacacagcgtgagcgtgaaaaggctcttgagatgttccgatct
ggacgctgccctcttctcgtcgcgactgctgttgctgctcgtggattggatatccccaac
gtcaagcacgttgtcaactacgacctgcctaccgacattgacgactacgtccaccgtatt
ggtcgtaccggacgtgctggaaacactggtatcgcgactgcattcttcaaccgtggcaac
cgcggtgtcgtccgtgacctcatcgagctgctgaaggaggccaaccaagaggttcccagc
ttcctcgagtccattgctcgcgagggttctggcttcggtggcggtcgtggtggacgcgga
ggcggtcgtggccgtggcaatgctgctacccgtgacgttcgtcgcatgggcggcggtggt
ggtttcggcggcggcggtggcaacggtggcagctggggcggctctcaaggctacggagga
ggtggttacggcggcgctcccggtggcggttatgctgccccagcccctgcctacggtggc
ggcggtggttatggtggtggtggctacggcaacccatctggccccggcggcaactcttgg
tggtaa
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