Bipolaris oryzae: COCMIDRAFT_94940
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Entry
COCMIDRAFT_94940 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
bor
Bipolaris oryzae
Pathway
bor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COCMIDRAFT_94940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_94940
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
COCMIDRAFT_94940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
RPN13_C
SWI2_SNF2
ZGRF1-like_N
Motif
Other DBs
NCBI-GeneID:
19128548
NCBI-ProteinID:
XP_007687846
JGI:
Cocmi1_94940
UniProt:
W6Z791
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MKPFRPLTLSRPRPENGEPPSKKRKIGSNVLSASNRQPLNTMNNPAPAQFLPPGLEGNYY
TVLWRKHTTKKNKTWDGDGVLAVVGGYATLNDSETGKELGKGACSRPLLPGSTLSIGGRE
IEVENSMDKADYLSGRMFLGKAAAAPIQQSKRPEPGHKPLSSVKPNSKRKQETSDDKESV
PEYKPSTHRKQQFKAPLLSTTVMPQRNPSIPQPRHDPNAPNALIMKRPDSCPKGKQIVDV
VIDPVLSKHLRDHQREGVRFLYECVMGMRCEGEGAIMADEMGLGKTLQTITLLWTLMKQN
PIHDSPPVIKKALIVCPAGLVDNWKREFRKWLGNERVGVFVLDAKNKKIANFTMGKSYNI
MIVGYEMLRIVQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQSLNTERRIILSGTPLQ
NDLGEFYTAIDFVNPGLLGQRAAFKRSFELPIMRSRQPDASEVELEKGEARWKELVSLTS
QFMIRRTAEVLSKYLPPKTEHIVFCRPTKGQAETYRAILDSPTFRLALGSTDIALQLINV
LKKVCNSPSLLKSSKDNDDTPSEMLQSIIPLIPSKILKSSASSAKLRLLDSLVHSIYTTT
EEKIVIVSNYTTTLDMIERLLVSLSYTFLRLDGSTPASKRQSLVEKFNKTPKTTSFAFLL
SAKSGGVGLNLIGASRIVLFDIDWNPATDLQAMARIHRDGQKLPCKVYRFLVQGGLDEKI
YQRQVMKMGLANAVVDNKASASSFSQEELRDLFRLDEREGCQTHDLLGCTCECRGKLEGT
PDPDNGESEEDEVEEEEYPMLRKASEVNIEEQEAKIKARRAAKQPKLRMLMEYRHIDTKV
LKGMDKSADEGSADDEVVDDLAVAVDDDVFLDVLKQPECNVGFLLTKSTS
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctttccggcctctcactctctcgcgcccgcgtcccgaaaatggcgagccacca
agcaagaaacgaaaaattggatccaatgtattgtcggcgagcaaccgtcaaccgctcaat
actatgaacaatcctgcaccagcacaattcctacccccgggtctcgaagggaactactat
acggtattatggcgaaaacatacgaccaaaaaaaataagacatgggacggggacggcgtt
cttgctgtcgtgggtggatacgctacgctcaacgacagcgagacggggaaagagctggga
aagggagcatgcagtcggccactactccccggatctactctttccattggtggaagggaa
atagaagttgagaattccatggataaggcagattacctctcaggacgcatgttcctaggc
aaggctgcggctgcaccaatacagcagtcaaagcggcctgagccaggacacaagcctctg
tcatcagtgaaacccaattcgaagaggaaacaggaaactagcgacgataaggagagtgtg
cccgagtacaagccttcaactcatcgcaagcagcaattcaaggcaccgttgctatctacc
actgtcatgccgcagcgcaacccgtcaattccgcaaccccgtcacgacccaaatgcaccc
aacgccctcatcatgaaacgacctgattcgtgtcccaaaggaaagcagatagtcgacgtg
gtcatcgacccggtcctcagcaagcatctccgagaccaccagcgcgagggtgtacgattt
ttgtatgaatgcgttatgggtatgcgatgcgagggtgagggtgccatcatggctgacgag
atgggcttgggtaaaacgctgcagaccatcacacttctctggacattgatgaagcagaat
ccgatacatgattcccctcctgttatcaagaaagccctaattgtctgtcctgctggtcta
gtagataattggaaacgtgagttccgcaagtggctcggaaatgagagagtcggtgtgttc
gtcttggatgcaaagaacaagaagattgccaacttcaccatgggcaagtcttacaacatt
atgattgtcggatacgagatgcttcgtatcgttcaagaagagttgaagaaaggcagtggt
gtcgacattgtcattgccgacgagggtcataggttaaagacggctaacaacaaagctatg
cttgctatccagtctctgaacacggagaggcgtatcatcctgtccggtaccccattgcag
aacgatcttggcgagttctatactgccatcgatttcgtcaaccctggactcctcggacaa
cgagccgccttcaagcggtcgttcgaactgccaattatgcgtagtcgtcagccggacgca
agcgaagtagagcttgaaaagggcgaggcacgctggaaggagcttgtatctctgactagt
cagttcatgatccggcggacagcagaagtcctttcgaaatacctaccgccgaaaactgag
cacattgtcttttgtaggccgaccaaaggacaagcggagacctaccgcgctattctggac
tcaccaacctttagacttgccctgggtagtacggacattgcgctgcagctcatcaacgtg
ctgaagaaagtctgcaacagcccttcattactcaaatcgtccaaggacaatgatgacacg
ccatctgagatgctgcaatccatcatcccactcatccccagcaagatcctcaagtccagc
gcctcaagtgcaaagttgcgattgctcgacagccttgtccattctatctacacgacgacc
gaagaaaaaatcgtcatagtctcaaactacacaacaacactagacatgatcgagcgcctc
ctcgtctccctctcttataccttcctccgcctcgacggcagcacgccagcctccaagcgc
cagtcccttgtcgagaaattcaacaaaacccccaaaacaacctctttcgccttcctcctc
tcagccaaatctggcggcgtgggcctcaaccttatcggcgcctcgcgcatcgtcctcttc
gacatcgactggaaccctgccactgatctacaagccatggcgcgcatccaccgcgacggc
cagaagctgccctgcaaggtctaccgcttcctcgtacagggtggtctcgacgagaaaatc
taccaacgccaagtcatgaaaatgggtctcgctaacgcagtcgtcgacaacaaagcctcc
gcatcctccttttcccaagaggaactccgcgatttatttcgtctagacgagcgcgaaggg
tgccagactcacgatttactcggctgcacgtgtgagtgtcggggcaagctcgaaggtaca
cccgatcctgacaatggagagtctgaagaggacgaagtggaagaagaggagtacccgatg
ctgaggaaagctagcgaggttaatatcgaggagcaggaggccaagattaaggcgaggcgc
gcggcgaagcagccaaagttaaggatgttgatggagtatcggcatattgataccaaggtt
cttaagggcatggataagagcgctgacgagggaagtgcggacgatgaggtagtggatgat
ttggcagttgcggtggacgatgatgttttccttgatgtcttgaagcagccggagtgtaat
gtggggttcctgcttaccaagtcgacgtcgtag
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