Bipolaris oryzae: COCMIDRAFT_95563
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Entry
COCMIDRAFT_95563 CDS
T03125
Name
(RefSeq) polysaccharide lyase family 3 protein
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
bor
Bipolaris oryzae
Pathway
bor00040
Pentose and glucuronate interconversions
bor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
COCMIDRAFT_95563
Enzymes [BR:
bor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
COCMIDRAFT_95563
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-GeneID:
19128687
NCBI-ProteinID:
XP_007688063
JGI:
Cocmi1_95563
UniProt:
W6Z654
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MEFARLVVAVTALLPTAFACNGYTGGVPAAVGTKTNSKVIEIAAGQTFDGQWYRYDRGSG
ACSGQTEGGASDAVFLLKEGATLRNVIIGKNQAEGVHCQGHCRLEYVWFEDVCEDAISIK
SDKPGKESWIIGGGAYHASDKVVQHNGCGTVNIINFYVNDYGKLYRSCGNCSTQCKRNVY
IEGVTAVKGNELAGINSNYGDTATLRNVCSDAKVKCQMYTGCAGGCEPQKAGVCSG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgcccgactcgtcgttgccgttacggccctccttcctactgctttcgcctgc
aatggatacactggaggtgtacctgccgctgtcggcaccaagaccaacagcaaggtcatc
gagatcgcggctggccagacctttgacgggcaatggtatagatatgatcgcggtagcggt
gcctgctctggtcagacagagggaggtgcttcagacgctgtattcttgctgaaggagggc
gcgactctccgcaacgtaatcattggcaagaaccaggctgagggtgtccattgccagggc
cattgccgtctcgagtatgtctggtttgaggacgtctgtgaggacgccatctcaatcaag
tcggacaagccaggcaaagaatcttggattatcggtggcggtgcctaccacgcctcagac
aaggttgtccagcacaacggatgtggtaccgttaacatcattaacttttacgtcaacgac
tacggcaagctttaccgctcttgcggaaactgctccacgcaatgcaagcgtaacgtttac
atcgagggtgttactgctgtcaaaggaaatgagttggccggtatcaacagcaactacggc
gacactgctactctaagaaacgtctgctctgacgcaaaggtcaagtgccagatgtatact
ggttgtgctggtggttgcgagccccagaaggctggtgtttgctctggctaa
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