Bipolaris oryzae: COCMIDRAFT_95795
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Entry
COCMIDRAFT_95795 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bor
Bipolaris oryzae
Pathway
bor03440
Homologous recombination
bor03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COCMIDRAFT_95795
03460 Fanconi anemia pathway
COCMIDRAFT_95795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bor03032
]
COCMIDRAFT_95795
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_95795
Enzymes [BR:
bor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
COCMIDRAFT_95795
DNA replication proteins [BR:
bor03032
]
Eukaryotic type
DNA Topoisomerases
COCMIDRAFT_95795
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
COCMIDRAFT_95795
FA (Fanconi anemia) pathway
COCMIDRAFT_95795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
19128724
NCBI-ProteinID:
XP_007688143
JGI:
Cocmi1_95795
UniProt:
W6Z5S8
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MTRVLCVAEKPSIAKAVAGHLGGQPRAESVRGIQWVKNYKFDFRFNNWGQCSVTFTCVAG
HIVSQEFNDRYRKWHSCQPVSLFEAPIVSGIAENKKAVASNIETQARYASILFIWTDCDR
EGEHIGTEIRDIALKANPNMQVWRARFSNIERAHVIQASQNPIRLDEAQAQAVSARIELD
LRLGAAFTRMQTLALQNMIPQQGEERGKLISYGSCQFPTLGFVVDRYLRVRNFVPEPFWY
IKVTHEKDSIDVKFNWRRGHLFDRMAVILIMERCLLSKTATVTKMAKKPTKKWKPLPLTT
VELQKNGSRFLRMTSQDVMKVAEDLYTKGWISYPRTETDQFDRGMDLRTLVGRQAQDGRW
GLFAQHLMNGGFQQPRQGRNNDKAHPPIHPVNYVAPTQLNDRERAVYEFVVRRFLACCSE
DAVGEATDIEIEYGGEVFHAHGLRVIARNYLDVYPYDKWESSQVLPQYAVGEELKPTEVN
MVDGQTTAPSYLTEPELIALMDANGIGTDATMAEHIATIKEREYVIARPKGGGGAGASGG
NGAAASRGQGRGRGSRGGRGGRGGAATGQAGGGNTGGVQEFIPTTLGVALIEGYDNVGFE
TSLSKPFLRKQMEEQMKAICEGRSTRNDVVQQNLEQYRVVFNRTVQQINVLKSAITKYVV
NANHG
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgggtgttgtgcgtggcagaaaagccttccatcgcaaaggcagttgcaggccat
ctcggtgggcaaccccgagctgaaagcgttcggggcatccaatgggtcaagaactacaag
tttgattttcgcttcaacaactggggccagtgttctgtcacctttacctgtgttgctggt
cacattgtcagccaggagtttaacgacagatatagaaaatggcactcatgccagcccgtc
tctctattcgaagcaccgattgtgtctggaatagcagagaacaagaaagctgtggcgagt
aacatcgagacccaggcgaggtacgcgtcaattctgttcatatggaccgattgtgaccgt
gagggcgagcacattgggaccgagatccgcgacattgcactcaaggcgaatccaaacatg
caagtgtggcgagcacgtttcagcaatatcgagcgagcacatgtcattcaagcgtcacag
aatccaatccgtctggatgaggcacaggcgcaggccgtctcggcgcggattgagctggat
ctgcgactgggagccgcatttacgcgaatgcagacgctagcgctccagaacatgatcccc
cagcaaggcgaagagcgaggcaagctaatcagctacggctcttgccagtttccaactctg
gggttcgtggtagaccgctatttgcgagtgcgcaactttgttccagagccattctggtac
atcaaggtgacacacgaaaaggatagcattgatgtcaaattcaactggcggcggggccac
ttgtttgaccgcatggccgtcattctcatcatggaacgctgtctgctttccaagactgca
actgtgacgaagatggcaaagaaacctaccaagaaatggaagccgctgcctctgacgact
gttgagctacaaaagaatggaagcagatttcttcgcatgacgtcgcaggacgttatgaag
gtggccgaggacttgtataccaaaggctggatcagctacccgcgcacggaaacggaccag
tttgatcgcggcatggacctgcgaacccttgtggggcggcaggctcaagatggtcgctgg
gggctattcgcacaacatctgatgaatggtggttttcagcagcctcgccaggggcgcaac
aacgacaaagcacatcctcccatccatccagtaaactatgtggcacctacacagctcaac
gaccgggagcgtgcagtgtatgaatttgtggttcgccggttcctagcttgctgctccgaa
gatgctgttggtgaggctacagatattgaaattgagtacggaggggaagtgttccatgcg
cacggcctccgggtcattgcaagaaactacctagacgtgtacccgtatgacaaatgggag
agcagtcaggtgctgccacagtatgcggtaggagaagagcttaagccgaccgaggtgaac
atggttgatggtcagacgacggcgccaagctaccttacggagcccgaattgatcgcactg
atggacgccaacggaattggtacggatgcaaccatggccgagcacattgccacaatcaag
gaacgcgaatatgtgattgcgcggcccaaaggcggtgggggcgctggtgctagtggtggg
aatggtgcagcagcaagcagagggcaagggcgaggaagaggttcgcgtggagggcgtggt
gggcgaggcggcgcagcaacaggacaagccgggggagggaacacgggcggagttcaagag
tttatcccgacgacgctgggggttgcgctcattgaggggtacgacaatgtggggtttgag
acgagcctgagcaagccgtttctccgtaagcagatggaggagcagatgaaggcgatatgc
gaaggccgcagcacgcgcaacgacgttgttcaacaaaacctggagcaatatcgggtagtg
ttcaatcgcacggtgcagcagatcaacgtgctgaaatcggccatcaccaagtatgtcgtc
aacgcgaatcacgggtga
DBGET
integrated database retrieval system
