Bipolaris oryzae: COCMIDRAFT_96643
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Entry
COCMIDRAFT_96643 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bor
Bipolaris oryzae
Pathway
bor03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCMIDRAFT_96643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_96643
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_96643
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
COCMIDRAFT_96643
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
COCMIDRAFT_96643
PBAF complex
COCMIDRAFT_96643
GBAF(ncBAF) complex
COCMIDRAFT_96643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DUF7006
Motif
Other DBs
NCBI-GeneID:
19128889
NCBI-ProteinID:
XP_007688455
JGI:
Cocmi1_96643
UniProt:
W6Z503
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MISRNDLAHLFRNPGPIVHPQHPPQQPQYNTSASMQASQRAEAERREKMRRIAKNPTDKN
IPEGVEDVCIGDGVARYKELRQVERTLDATMMRKKLDVMDSKHHSRASRYGTMRIWISNT
AENQPWQSSGIDADAFDFESENNATYRVKIQGRLLDEQGDDGLEDDEDEDKDADAMVEDS
AQAERKPATKPKLFSHYFTSINIDFDRAKSLQPDNFTQIEWKRPENPTAKEANFSEIEFE
RKGDENINITINLQRYQNPEVFRLSKPLAELLDTDEEDRAGVLMGIWEYARSQHLQQEDD
ERKFACDARLKALFGGQDHFFFPNLPQLIKPHLTTLPPIQLQYTIRVDKDYISPPADSGK
PASQPSVYDVQVALEDPMQPLFQDILRRPDSIQTLQEIQKIDEQLVLLMGAIGQSKAKHA
FFTSMSKDPVAFFKRWLSSQKRDLEVLLGEATRGGGEDASGEEWRRGGADGVWGSDVAKE
SVALWLARSSIKPR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgattagcaggaacgacctcgctcacttgtttcgcaacccaggccccattgtccacccc
cagcacccgccccagcagccccagtacaacaccagcgccagcatgcaggcttcgcagcgc
gccgaagcagagcgccgcgagaagatgcgccgcattgcaaagaaccctaccgacaagaac
attcccgagggcgtggaggacgtgtgcatcggcgacggtgtcgcccggtacaaggaattg
cgccaggttgagcgcactctcgacgcgaccatgatgcgcaagaagctcgatgttatggat
tcgaagcaccactcgcgagcgtcgcgctatggaaccatgcgcatatggatatccaacacg
gccgaaaaccagccttggcagagcagcggtatcgacgccgatgcctttgactttgagagc
gaaaacaacgccacgtaccgcgtcaagatccagggacgcctgcttgacgagcaaggcgac
gacggtctcgaggatgatgaggacgaagacaaggatgctgatgctatggtcgaagacagc
gcccaggccgagcgcaagccagccacgaaacccaagctcttctcgcactacttcacatcc
atcaatatcgactttgaccgcgccaagagcttacaacccgacaattttacgcaaatcgaa
tggaagcgacccgagaacccgacggccaaggaagccaacttcagcgaaatcgaatttgag
cgcaagggtgacgagaacatcaacatcacaatcaacctccagcgataccaaaatcccgag
gtcttccgcctcagcaaaccgctggccgagctgctcgacaccgacgaggaggaccgtgca
ggtgtgctgatgggcatctgggagtatgctcggtcacagcacttgcagcaagaagacgac
gagcgcaagttcgcctgcgacgccagactgaaagccctcttcggtggccaggatcacttc
ttcttccccaacctcccccagctcatcaagccccacctcaccaccctcccgcccatccag
ctccaatacaccatccgcgtcgacaaggactacatttccccacccgccgactccggtaag
ccggcatcccagcccagcgtctacgacgtccaagttgccctcgaagaccccatgcagccc
ctcttccaagacatcctccgccggcccgatagcattcagacgctccaagaaatccagaaa
atcgacgagcaactcgtgttgcttatgggtgcgatcggccagtctaaagctaaacacgct
ttcttcaccagcatgtctaaagaccccgttgctttcttcaagcgctggctctcgagccag
aagcgcgatctcgaggtcttacttggagaggctacgcgtggtggtggcgaggatgcctca
ggcgaggagtggaggcgcggtggtgcggatggggtttggggcagtgatgttgcaaaggag
agtgtggctttgtggcttgctaggtcgagtatcaagcccaggtga
DBGET
integrated database retrieval system
