Bipolaris oryzae: COCMIDRAFT_97566
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Entry
COCMIDRAFT_97566 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
bor
Bipolaris oryzae
Pathway
bor03022
Basal transcription factors
bor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCMIDRAFT_97566
09124 Replication and repair
03420 Nucleotide excision repair
COCMIDRAFT_97566
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bor01001
]
COCMIDRAFT_97566
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_97566
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_97566
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_97566
Enzymes [BR:
bor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
COCMIDRAFT_97566
2.7.11.23 [RNA-polymerase]-subunit kinase
COCMIDRAFT_97566
Protein kinases [BR:
bor01001
]
Serine/threonine kinases: CMGC group
CDK family
COCMIDRAFT_97566
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
COCMIDRAFT_97566
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
COCMIDRAFT_97566
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
COCMIDRAFT_97566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Motif
Other DBs
NCBI-GeneID:
19129085
NCBI-ProteinID:
XP_007688814
JGI:
Cocmi1_97566
UniProt:
W6Z4Q3
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MASPVVLSPRPNPPGAAMSAASKMRTLALPSHTTKPVKSPAPPAPATVAGDGGMDLAEQM
NDRVRSQFVMGPRLGEGTYAVVYQAHYRDNPKHIVAIKKIKYNAEYPNGIAPDAIREMQF
LFEMSHPNVIKLHDVFSTKEQNLSLVLEHLPLGDLEKLWKNKEITYTKADIKAWMNMLCQ
GIWFCHENFVLHRDIKGSNALIAADGTIKIADFGLARSFADPGVKMTTMVITRMYRPLEL
LYGCSHYGGTADMWSIGVLMAELCKRDWFLYSDTDMRQVAVICEKFGTPTEETWPGVTAL
PYYVAPDKQTGPQGTTAFRQTRPRSWWKQEFPTLGDDGCDFIRGLLTLDPQKRYTARKAL
EDKWWTNAPRPTKKENLPKEGGGTKAMGEDLKRRGGETPANGRADKVARKLDFGSMG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcccgtcgtcctcagcccacggcctaatccgcccggtgcggccatgtctgcc
gcgagcaagatgagaacgctcgccctcccaagccacaccaccaagcccgtcaagtcgcca
gcgccacccgcgcccgccacggtagccggtgatggcggcatggacctcgcagaacagatg
aacgaccgggtacggagccagttcgtcatgggtccacggttaggagagggtacctacgcc
gtcgtataccaagcgcactaccgcgacaaccccaagcacattgtcgccatcaagaaaatc
aaatataacgccgaatacccgaacggcatcgcgcctgacgccatccgcgaaatgcaattc
ctcttcgaaatgtcgcaccccaacgtcattaaactgcacgacgtcttctctaccaaagaa
caaaacctctccctagtcctcgagcacctgcccctcggcgacctcgagaaactctggaaa
aataaagagattacatacacaaaagcagacatcaaggcctggatgaatatgctctgccag
ggcatatggttctgccacgagaacttcgtcctccaccgcgatatcaagggcagcaacgct
ctcatcgccgcagacggcaccatcaaaatcgccgatttcggtctcgcacgcagcttcgcg
gatccaggcgtcaaaatgaccaccatggtcataacgcgcatgtaccggcccctcgagctt
ctctacggctgttcgcactacggcggcacagcagacatgtggagcataggtgttctcatg
gccgaactctgcaagcgcgactggttcctgtattccgacacggacatgcgccaggtcgcc
gtcatctgcgagaaattcggtaccccgacggaagagacgtggccgggcgtcaccgcttta
ccttattacgtcgcccccgataaacagacggggccgcagggtacgaccgcgttcagacag
acccgcccccgtagctggtggaagcaagagttccccactctcggagatgatgggtgcgat
tttatcaggggcctgttgacgctggatccgcagaagaggtatacggccaggaaggcgctc
gaggataagtggtggactaatgcgccgcgtccgactaagaaggagaatctgccaaaggaa
ggcgggggtaccaaggctatgggtgaggatttgaagcggagagggggagagacgcctgcg
aatggtcgcgctgataaggtggctaggaagctggattttggatccatgggttga
DBGET
integrated database retrieval system
