Bipolaris oryzae: COCMIDRAFT_98522
Help
Entry
COCMIDRAFT_98522 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
bor
Bipolaris oryzae
Pathway
bor00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCMIDRAFT_98522
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bor01007
]
COCMIDRAFT_98522
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bor03016
]
COCMIDRAFT_98522
Enzymes [BR:
bor01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
COCMIDRAFT_98522
Amino acid related enzymes [BR:
bor01007
]
Aminoacyl-tRNA synthetase
Class I (U)
COCMIDRAFT_98522
Transfer RNA biogenesis [BR:
bor03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
COCMIDRAFT_98522
Prokaryotic type
COCMIDRAFT_98522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
PepSY
Motif
Other DBs
NCBI-GeneID:
19129280
NCBI-ProteinID:
XP_007689193
JGI:
Cocmi1_98522
UniProt:
W6Z3H5
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MALNASSHNTTGDKTAPNTAPPPELSGEAKKDILGAAETEATGQHAPGRENEKGVEKKEK
TAKELEKERKKAEKDAKFKAKKAAAAGAAKDAPAKEKKKKGKEEEQLPEYVEQTPKGEKK
RLQSLDGPYTKAYIPKVVESAWDAWWDAQGFFKPQFAEDGNVKAPGHFVIPIPPPNVTGK
LHCGHALATSLQDVLIRWHRMRGYTTLYLPGCDHAGIATQSVVEKMLKRRENKTRYDLGR
QKFLERTMEWKQEYHQHLTNTLRRMGGSFDWTREAFTMDENLSKAVTETFVRLHEDGLIY
RSNRLVNWCTALNTALSTLEVDNKDLAGPTKLSVPGYERMVEFGVLTHFKYAIDGTDQFI
EIATTRPETMLGDSGIAVHPKDDRYKHLVGKKAKHPFIDRLMPIVADEYVDPEFGTGAVK
LTPAHDPNDFNLGKKHNLEFINILNDNGTMNKNAGRFEGEKRFDVRYTVVDALKKEGLFV
KTEPNPMKVPICSRSGDVIEPIMKPQWWMKMESLAKPAIEAVEKGDIKIRPATSEKIYMH
WMNNVQDWCLSRQLWWGHQIPAYFVQIEGAEGDRNEDELWITGRTEEEARAKAEKKFPGK
KFTLSRDEDVLDTWFSSGLWPFSTLGWPNQTADLEKLFPTSVLETGWDILFFWVARMIFL
SLYLTGKVPFKEVYCHSLIRDSEGRKMSKSLGNVVDPVDIMDGITLQKLHDQLRAGNLDP
KELTKAEKYQKTAFPQGIPECGADALRMALVGYTTGGGDISFDVNVIHGYRRFCNKIYQA
TKYVIGRLGESFTPQEKAGKSGKESLPERYILHNLNAAAKKINDHLEAREFSLATQVAYK
YFYVYLCDTYIENSKAIFDEGSEEQKESAKQTLYTAIEGGLNMIHPFMPFLTEELWQRLP
RRQGDKTPSICIAPFPQYSQELEDETANAEYELLVDSAKGLRSMTAEYGIKDSASTYIQA
LDDSTHSILSSSTSLPSIKSLAGKTVSEIKILSPSETAPSGCAVYTIGTSATAYLDVKGR
IELDKEITKAQDRLTKANETITRQKKIMDNDWEEKVSDVVKEQEREKLKAAELEAKNWEA
SIAQFEKMKIE
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaatgcgtcctctcacaacaccactggtgacaagacagcgcccaacaccgct
ccaccgccagagctgagcggagaagccaaaaaggacattctcggtgccgctgaaactgaa
gccaccggtcaacatgcgcccggtcgcgagaatgaaaagggtgtagagaagaaggagaag
actgccaaggagctggagaaagagaggaaaaaggccgaaaaggacgcaaagttcaaggcc
aaaaaggccgctgctgctggcgccgccaaggacgctccggcaaaagagaagaaaaagaag
ggcaaggaggaggagcagttgcccgagtacgtcgagcagacacccaagggcgagaagaag
cgtcttcagagcttggacggtccatacacaaaggcatatattcccaaggttgtcgagtct
gcgtgggacgcttggtgggacgctcaaggtttcttcaagcctcagttcgccgaggatggc
aatgtcaaggcccctggccacttcgtcattcccatcccaccacccaacgtcacgggcaag
ctacactgtggacatgcgctcgctacgagtctgcaagatgtcttgataaggtggcacagg
atgagaggctacactacgctgtatcttcctggttgcgatcacgccggtattgctactcag
tccgttgttgagaagatgttgaagcgaagggagaacaagacgcgatatgacctgggtcgt
caaaagtttcttgagaggaccatggagtggaagcaagagtaccaccagcatcttaccaac
accctgcgccgaatgggtggttcctttgactggacgcgcgaggccttcaccatggatgaa
aatctgtcaaaagcagtcacagagacgtttgtccgcctccacgaagacggtctgatttac
cgaagcaacaggttggtcaactggtgtacagccttgaacacggctttgagtactcttgaa
gtcgataacaaggatctggctggcccgactaagttgtctgttccgggatacgagaggatg
gttgagttcggtgtccttactcacttcaagtacgccatcgatggtactgaccaattcatc
gaaattgctaccacacgtcctgaaaccatgcttggtgactctggtatcgccgtccatccc
aaggatgaccgctacaagcacctcgtcggaaagaaggccaagcaccccttcatcgaccgt
ctcatgcccattgttgcagacgaatacgtcgaccctgagttcggtactggagctgtcaag
ctgacgccagcacacgaccccaacgatttcaaccttggaaagaagcacaaccttgagttc
atcaacattctgaacgacaacggaacaatgaacaagaatgccggtcgtttcgagggcgag
aagcgcttcgatgttcgttacaccgttgtagacgcactaaagaaggagggactgttcgtc
aagaccgagccaaacccaatgaaggtgcccatttgctcaagatctggcgatgtcattgaa
cccattatgaagccgcaatggtggatgaagatggaaagtctagccaagcctgccatcgaa
gccgtcgagaagggtgacatcaagattcggccagccacttccgagaagatctacatgcac
tggatgaacaacgttcaggactggtgcttgtctcgtcagctttggtggggccaccaaata
ccagcctatttcgtccaaatcgaaggcgccgaaggtgaccgcaacgaagatgagctctgg
attactggccgtacagaggaagaggcaagagctaaggccgagaagaagttccctggaaag
aagttcacattatcgcgagacgaggacgtgctagacacatggttctcctctggcctatgg
ccgttctctactctgggttggccaaaccagactgctgaccttgagaagctcttccccacc
tctgtccttgagaccggttgggatattctcttcttctgggttgctaggatgattttcctt
tccctctacttgactggaaaggttccgttcaaggaggtttactgccactcccttatccgt
gactctgaaggcaggaaaatgtcaaagtcgcttggtaacgttgtggaccctgtcgatatc
atggatggtatcacccttcagaagctccatgaccagcttcgcgcaggtaacctggatccc
aaggagttgaccaaggccgagaagtaccagaagaccgccttccctcaaggtatcccagag
tgtggtgctgatgcgctccgtatggcacttgtcggatacactactggtggtggagacatc
tcgttcgacgtcaatgtcattcacggatacaggagattctgtaataagatctaccaggcc
accaagtatgtcattggacgcttgggagaatctttcacaccgcaggagaaggccggaaag
agcggaaaagagtctctgcctgagcgctacatcctccacaatctcaacgccgctgccaag
aagatcaacgatcacctggaggcgcgcgagttcagtcttgccacccaggttgcctacaag
tacttctacgtctacctctgcgatacatatatcgagaacagcaaggccatattcgacgag
ggaagcgaagagcagaaggaaagtgccaagcagacgctttacactgccattgagggtggt
cttaacatgattcacccgttcatgcccttcctcaccgaggagctctggcagcgcctgccc
cgaaggcaaggtgacaagacaccttccatctgcattgcgcctttcccacaatactcgcaa
gagttggaagacgagacggcaaacgccgaatacgagcttctcgttgacagcgcaaagggc
cttcgttctatgaccgcagagtacggcatcaaggatagcgcatccacatatatccaagcc
ctcgacgatagcacacactccattctctcttcctccacatctctcccttcaatcaaatct
ctggcaggcaaaaccgtatccgagatcaagatcctgtcaccctctgagaccgcgccctct
ggctgcgccgtatacacaatcggcacatcagcgaccgcgtacctcgacgtcaagggccgc
attgagctcgacaaggaaatcacaaaggcccaggatcgcctcacaaaagccaacgagaca
atcacgcgccagaagaagattatggataacgactgggaggagaaggttagtgatgtggtc
aaggagcaagagagggagaagcttaaagctgccgagttggaggccaagaactgggaggcg
agtattgcacagtttgagaagatgaagattgagtag
DBGET
integrated database retrieval system
