Borrelia sp. A-FGy1: F0310_01880
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Entry
F0310_01880 CDS
T10492
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
borr Borrelia sp. A-FGy1
Pathway
borr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
borr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F0310_01880 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
borr03021
]
F0310_01880 (rpoB)
03400 DNA repair and recombination proteins [BR:
borr03400
]
F0310_01880 (rpoB)
Enzymes [BR:
borr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F0310_01880 (rpoB)
Transcription machinery [BR:
borr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F0310_01880 (rpoB)
DNA repair and recombination proteins [BR:
borr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F0310_01880 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QMU99171
LinkDB
All DBs
Position
complement(400842..404309)
Genome browser
AA seq
1155 aa
AA seq
DB search
MIKRVHLGQGKAEEILDLPNLIEIQLNSYEKFLQLERLKNKEPLLNEGLESVFRNVFPIK
SSNGEVALEYEKYYIEDDSLSFTEKECKRKGQSYEAVLKIRLNLQFLTTGEIRQKDVYLG
TIPLMTNRGTFIVNGAERVIVSQIHRSPGVVFYRERDLYFARIIPYRGSWLEFEIDSKKD
YLYVKIDRKKRILVTLFLRALGLDTREKIIDTFYKIRKIEVNEDTKREIAGQYLAVNINI
KENMTYRAGDKITLQDVEDFFQNGIKQIKLIDFDGYDSVPGKYFISSDIILNCFEKEDAY
FSLKDGFKELSRESVMLAVYNVLLPGEPISIDSAENDLRTVFFSEKRYDLGHVGRYKLSK
KFGLDDLTTSVLTMTDIVNTIAHLLRIYDGHDTLDDIDHLGNRRVRSVGELLTNIYKGAM
TRVEKIARDRMSNKEVFNLKPQELISVKPIVSAVKEFFATSQLSQFMDQVNPLAELTHKR
RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYARVNDYGFLE
TPYRKVVDGKVTHEIEYLSAIDEEKKSIAQANADVDADGNYIEDLISVRISGDYTTMVPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPQPPIVGTGMERVV
AKYSGVVIKARRAGTVILATNKKIIIRPSEANGASDLDEYYLSKYERTNQDTSFNQSVLV
KEGQEVSVGEIIADGPATRYGELALGNNLLVGFIPWNGFNYEDAILISERIVKEDLYTSI
HIKEFSIEVRETKLGPEKVTADIPNVSSKILSKLDENGIIIIGTYVKPGDILVGKVTPKS
EGDITPEFKLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKDDVGNLPPGVDEILK
VYIAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLSDGTPLDICLNPLGVPSRMNIGQ
LMESQLGLAGKYLGEYYDIPVFESATNEQIQENLRKAGFNETSKEILYDGYTGEQFENEV
MVGVIYMLKLHHLVDDKMHARSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAH
TLQELLTVKSDDMSGRVKIYENIVKGIPTNVSGIPESFNVLLQELRGLGFDLSIYDDKGD
QVPLTEKEEELINKT
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagggttcatctaggacaaggcaaggcagaagaaattttagacttgcctaac
ctaattgaaatacaattgaattcttatgagaaatttttgcagcttgagagattaaaaaat
aaagaacctttgcttaatgagggacttgaatctgtttttagaaatgtttttcctataaaa
agtagtaatggtgaagttgctcttgagtatgagaaatactacattgaggatgattctctt
agttttacagagaaagaatgtaagaggaaaggacaaagctatgaggctgttttgaagata
aggttaaatttgcagtttttaacaacaggggaaataagacaaaaagatgtatacttgggt
accattcctttaatgaccaataggggtacttttattgtcaatggagcagagagggtaatt
gtatctcaaatacataggtctcctggggttgttttttatagggaaagggatttgtatttt
gctcgcattattccttatcgtggttcttggctagaatttgagattgattcaaaaaaagat
tacctttatgttaagatagataggaagaagagaatacttgttactcttttcttaagagcc
ttagggctagatactcgagagaaaataatagatactttttataaaattagaaaaattgag
gtaaatgaagatacaaaaagagaaattgcaggtcaatatttagccgtaaatattaatata
aaagaaaatatgacttatcgagctggtgataagataactttacaagatgttgaagatttt
tttcaaaatggaataaaacaaataaaacttattgattttgatggctatgatagtgttcct
ggaaaatattttattagttctgatattattttaaattgctttgaaaaagaagatgcttat
ttttctttaaaagatgggtttaaggaactttcacgggaatcagtgatgcttgctgtttat
aatgtacttttgcctggagaaccaatctctattgatagtgctgagaatgacttaagaaca
gtattcttctcagagaagagatatgatcttgggcatgtgggtcgatataagctttctaaa
aaatttggacttgatgatttaacaacttctgttcttactatgacagatattgtaaatact
atagctcatcttttaaggatatatgatggtcatgatactcttgatgatattgatcacctt
ggcaatagaagagttcgttctgttggtgaattacttacaaatatatataagggagcaatg
acaagagtagaaaaaattgcaagggatagaatgtctaataaagaggtatttaatcttaaa
cctcaggaattgataagtgttaaacctattgtttctgctgttaaggaattttttgcaact
agtcagctttcacagtttatggaccaagttaatcctttagctgaattaacacataaaagg
cgacttaatgctttgggtcctggaggactgtcaagagatcgtgcaggttttgaagtaaga
gatgttcactatactcattatggcaggatgtgtcctattgagactcctgaaggacctaat
atcggtcttattgtttctttagctacttatgctagagtaaatgattatggattcttagaa
actccttacagaaaagtggttgatgggaaggttactcatgaaatagaatatttgtctgca
attgatgaagaaaagaaaagtattgcacaggcaaatgctgatgttgatgctgatggtaac
tatattgaagatttaatttctgttaggatttctggtgattatactactatggttccaaaa
aatatagattatatggatgtttctcctaggcagttaatttctgtttcttctgcattaata
ccttttcttgaacataatgatgcgaaccgtgctcttatgggttcaaacatgcagaggcag
gcagtacctttattgtttccacagccacctattgttggtactggtatggaaagagtagtt
gctaaatattctggcgttgttattaaggcaaggagagcaggaacggtcatattggcaaca
aacaaaaaaataattataagacctagtgaagctaatggtgcttctgatttagatgaatat
tatctttctaaatatgagagaacaaatcaagatacttcttttaatcagtcagttttagtt
aaagagggccaagaggttagtgtgggtgaaataattgcagacggccctgctactagatac
ggtgaacttgctcttggaaataatttgctggttggctttattccttggaatggatttaat
tatgaagatgctatattaatatctgagagaattgtaaaagaagatctttatacttcaatt
cacattaaagagtttagtatcgaagtaagagaaactaagcttggacctgaaaaggtcacg
gcagatatccctaatgtaagttcgaagatattgagtaagttagatgaaaatggaattata
ataataggaacttatgtaaaaccaggtgatattttggttggtaaagttacgccaaagtca
gaaggagatattactcctgaatttaagcttttgacatctatttttggcgaaaaagcaaaa
gatgttaaaaataattcattgaaagttccgcatggtactgagggcactgtaattgatgta
caaaggataacaaaggatgatgttggaaatcttcccccgggggttgatgaaatattgaaa
gtttatattgctaagaaaagaaagcttaaagaaggggataaaatggctggaagacatgga
aataagggagtagttgcaaaaattcttcctgttgaagatatgccttatctttctgatgga
acgcctcttgatatatgtttaaaccccttaggggttccttctcgtatgaatattgggcaa
ttaatggaatcacagcttgggcttgctggcaaatatcttggtgagtattatgatattcct
gtttttgagtctgctacaaatgaacaaatacaggaaaatttaagaaaagctggatttaat
gaaacatcaaaggaaattttatatgatggatatacaggagaacagtttgaaaatgaggtt
atggttggagttatatatatgcttaagcttcatcaccttgttgatgataagatgcatgca
aggtctacaggcccttattcgcttgtttcacagcaacctcttggagggaaagctcaattt
ggagggcaaagacttggagaaatggaagtttgggcacttgaagcatatggggctgctcat
actctccaggagttgttaacagtaaaatcggatgacatgtcaggaagagttaaaatatat
gagaatattgttaagggcatacctactaatgtatctggaattcctgaatcttttaatgtt
ttgttgcaagagttaagagggctggggtttgatttgtcaatttatgacgataaaggagat
caagttcctttaacagagaaggaagaggaattaattaataaaacttag
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