KEGG   Borrelia sp. A-FGy1: F0310_01880
Entry
F0310_01880       CDS       T10492                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
borr  Borrelia sp. A-FGy1
Pathway
borr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:borr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    F0310_01880 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:borr03021]
    F0310_01880 (rpoB)
   03400 DNA repair and recombination proteins [BR:borr03400]
    F0310_01880 (rpoB)
Enzymes [BR:borr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     F0310_01880 (rpoB)
Transcription machinery [BR:borr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     F0310_01880 (rpoB)
DNA repair and recombination proteins [BR:borr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      F0310_01880 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: QMU99171
UniProt: A0A7D7WIV2
LinkDB
Position
complement(400842..404309)
AA seq 1155 aa
MIKRVHLGQGKAEEILDLPNLIEIQLNSYEKFLQLERLKNKEPLLNEGLESVFRNVFPIK
SSNGEVALEYEKYYIEDDSLSFTEKECKRKGQSYEAVLKIRLNLQFLTTGEIRQKDVYLG
TIPLMTNRGTFIVNGAERVIVSQIHRSPGVVFYRERDLYFARIIPYRGSWLEFEIDSKKD
YLYVKIDRKKRILVTLFLRALGLDTREKIIDTFYKIRKIEVNEDTKREIAGQYLAVNINI
KENMTYRAGDKITLQDVEDFFQNGIKQIKLIDFDGYDSVPGKYFISSDIILNCFEKEDAY
FSLKDGFKELSRESVMLAVYNVLLPGEPISIDSAENDLRTVFFSEKRYDLGHVGRYKLSK
KFGLDDLTTSVLTMTDIVNTIAHLLRIYDGHDTLDDIDHLGNRRVRSVGELLTNIYKGAM
TRVEKIARDRMSNKEVFNLKPQELISVKPIVSAVKEFFATSQLSQFMDQVNPLAELTHKR
RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYARVNDYGFLE
TPYRKVVDGKVTHEIEYLSAIDEEKKSIAQANADVDADGNYIEDLISVRISGDYTTMVPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPQPPIVGTGMERVV
AKYSGVVIKARRAGTVILATNKKIIIRPSEANGASDLDEYYLSKYERTNQDTSFNQSVLV
KEGQEVSVGEIIADGPATRYGELALGNNLLVGFIPWNGFNYEDAILISERIVKEDLYTSI
HIKEFSIEVRETKLGPEKVTADIPNVSSKILSKLDENGIIIIGTYVKPGDILVGKVTPKS
EGDITPEFKLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKDDVGNLPPGVDEILK
VYIAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLSDGTPLDICLNPLGVPSRMNIGQ
LMESQLGLAGKYLGEYYDIPVFESATNEQIQENLRKAGFNETSKEILYDGYTGEQFENEV
MVGVIYMLKLHHLVDDKMHARSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAH
TLQELLTVKSDDMSGRVKIYENIVKGIPTNVSGIPESFNVLLQELRGLGFDLSIYDDKGD
QVPLTEKEEELINKT
NT seq 3468 nt   +upstreamnt  +downstreamnt
atgataaaaagggttcatctaggacaaggcaaggcagaagaaattttagacttgcctaac
ctaattgaaatacaattgaattcttatgagaaatttttgcagcttgagagattaaaaaat
aaagaacctttgcttaatgagggacttgaatctgtttttagaaatgtttttcctataaaa
agtagtaatggtgaagttgctcttgagtatgagaaatactacattgaggatgattctctt
agttttacagagaaagaatgtaagaggaaaggacaaagctatgaggctgttttgaagata
aggttaaatttgcagtttttaacaacaggggaaataagacaaaaagatgtatacttgggt
accattcctttaatgaccaataggggtacttttattgtcaatggagcagagagggtaatt
gtatctcaaatacataggtctcctggggttgttttttatagggaaagggatttgtatttt
gctcgcattattccttatcgtggttcttggctagaatttgagattgattcaaaaaaagat
tacctttatgttaagatagataggaagaagagaatacttgttactcttttcttaagagcc
ttagggctagatactcgagagaaaataatagatactttttataaaattagaaaaattgag
gtaaatgaagatacaaaaagagaaattgcaggtcaatatttagccgtaaatattaatata
aaagaaaatatgacttatcgagctggtgataagataactttacaagatgttgaagatttt
tttcaaaatggaataaaacaaataaaacttattgattttgatggctatgatagtgttcct
ggaaaatattttattagttctgatattattttaaattgctttgaaaaagaagatgcttat
ttttctttaaaagatgggtttaaggaactttcacgggaatcagtgatgcttgctgtttat
aatgtacttttgcctggagaaccaatctctattgatagtgctgagaatgacttaagaaca
gtattcttctcagagaagagatatgatcttgggcatgtgggtcgatataagctttctaaa
aaatttggacttgatgatttaacaacttctgttcttactatgacagatattgtaaatact
atagctcatcttttaaggatatatgatggtcatgatactcttgatgatattgatcacctt
ggcaatagaagagttcgttctgttggtgaattacttacaaatatatataagggagcaatg
acaagagtagaaaaaattgcaagggatagaatgtctaataaagaggtatttaatcttaaa
cctcaggaattgataagtgttaaacctattgtttctgctgttaaggaattttttgcaact
agtcagctttcacagtttatggaccaagttaatcctttagctgaattaacacataaaagg
cgacttaatgctttgggtcctggaggactgtcaagagatcgtgcaggttttgaagtaaga
gatgttcactatactcattatggcaggatgtgtcctattgagactcctgaaggacctaat
atcggtcttattgtttctttagctacttatgctagagtaaatgattatggattcttagaa
actccttacagaaaagtggttgatgggaaggttactcatgaaatagaatatttgtctgca
attgatgaagaaaagaaaagtattgcacaggcaaatgctgatgttgatgctgatggtaac
tatattgaagatttaatttctgttaggatttctggtgattatactactatggttccaaaa
aatatagattatatggatgtttctcctaggcagttaatttctgtttcttctgcattaata
ccttttcttgaacataatgatgcgaaccgtgctcttatgggttcaaacatgcagaggcag
gcagtacctttattgtttccacagccacctattgttggtactggtatggaaagagtagtt
gctaaatattctggcgttgttattaaggcaaggagagcaggaacggtcatattggcaaca
aacaaaaaaataattataagacctagtgaagctaatggtgcttctgatttagatgaatat
tatctttctaaatatgagagaacaaatcaagatacttcttttaatcagtcagttttagtt
aaagagggccaagaggttagtgtgggtgaaataattgcagacggccctgctactagatac
ggtgaacttgctcttggaaataatttgctggttggctttattccttggaatggatttaat
tatgaagatgctatattaatatctgagagaattgtaaaagaagatctttatacttcaatt
cacattaaagagtttagtatcgaagtaagagaaactaagcttggacctgaaaaggtcacg
gcagatatccctaatgtaagttcgaagatattgagtaagttagatgaaaatggaattata
ataataggaacttatgtaaaaccaggtgatattttggttggtaaagttacgccaaagtca
gaaggagatattactcctgaatttaagcttttgacatctatttttggcgaaaaagcaaaa
gatgttaaaaataattcattgaaagttccgcatggtactgagggcactgtaattgatgta
caaaggataacaaaggatgatgttggaaatcttcccccgggggttgatgaaatattgaaa
gtttatattgctaagaaaagaaagcttaaagaaggggataaaatggctggaagacatgga
aataagggagtagttgcaaaaattcttcctgttgaagatatgccttatctttctgatgga
acgcctcttgatatatgtttaaaccccttaggggttccttctcgtatgaatattgggcaa
ttaatggaatcacagcttgggcttgctggcaaatatcttggtgagtattatgatattcct
gtttttgagtctgctacaaatgaacaaatacaggaaaatttaagaaaagctggatttaat
gaaacatcaaaggaaattttatatgatggatatacaggagaacagtttgaaaatgaggtt
atggttggagttatatatatgcttaagcttcatcaccttgttgatgataagatgcatgca
aggtctacaggcccttattcgcttgtttcacagcaacctcttggagggaaagctcaattt
ggagggcaaagacttggagaaatggaagtttgggcacttgaagcatatggggctgctcat
actctccaggagttgttaacagtaaaatcggatgacatgtcaggaagagttaaaatatat
gagaatattgttaagggcatacctactaatgtatctggaattcctgaatcttttaatgtt
ttgttgcaagagttaagagggctggggtttgatttgtcaatttatgacgataaaggagat
caagttcctttaacagagaaggaagaggaattaattaataaaacttag

DBGET integrated database retrieval system