Bosea sp. RAC05: BSY19_2369
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Entry
BSY19_2369 CDS
T04462
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
bos
Bosea sp. RAC05
Pathway
bos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSY19_2369 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bos03019
]
BSY19_2369 (rnr)
03016 Transfer RNA biogenesis [BR:
bos03016
]
BSY19_2369 (rnr)
Enzymes [BR:
bos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BSY19_2369 (rnr)
Messenger RNA biogenesis [BR:
bos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BSY19_2369 (rnr)
Transfer RNA biogenesis [BR:
bos03016
]
Prokaryotic type
tRNA degradation factors
BSY19_2369 (rnr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AOG04066
LinkDB
All DBs
Position
complement(2493096..2495438)
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AA seq
780 aa
AA seq
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MSAPEPSREAILDFIDAEREAGREVGRREIAKAFGLSGGGKIWLKRLLKELEEEGETGGD
GVDRPVHPRGALPPVLLCEIKGKDRDGDAYGVPLEWNEAEQGVAPRILIERPREFRAKRH
AAPAPAFGDQVLLKLTRLKGVEGYAYSGRVLKVMGKGKAQVLGIFRAMPDGSGRLIPIDK
KAQGREALIPKGQTGDAEDGDLVSVALRSESRFGPPEAQVKERLGSLKSERAVSLIAIHA
HGIPNVFQPATIAESEAVRPAGTAGREDWRDLALITIDPADAKDHDDAVHAAPDADPDNP
GGHVVTVAIADVAAYVRPGSALDREALERGNSVYFPDRVVPMLPERISNDLCSLREGEDR
PALAVRLVLKADGSKKSHSFHRILMRSAAKLSYQQAQAAIDGQGDEKGSAVRDTILMPLW
AAYGLAARARDARQPLDLDLPERKLILKPDGSVDRVVVPERLAAHKLIEEFMILANVAAA
ETLEKAGSLLVYRCHDEPSLEKIRALGEVLASIGIKLPKEGVLRPALFNRILGMIKGSEN
EIFINEVVLRSQAQAEYVAENYGHFGLNLRRYAHFTSPIRRYADLVVHRALIAAQRFGED
GLPKGTTLETLREVSTRISAAERRAMAAERETVDRLIAHFLADQIGASFDGRIGGVNKAG
LFVKLDGTGADGFIPASTLGADYYRYDEAAHALIGERTGESFRLGDRVHVKLVEAAPVAG
ALRFELLSAGRAATAGGLGGRGPAPRRGKGGAFGGPPGGRSGPGRFAKGKAGKPKSGKRR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgcgcctgaacccagccgcgaggcgatcctcgacttcatcgacgcagagcgcgaa
gccgggcgcgaggtcggccgccgcgagatcgccaaggccttcgggctctcgggcggcggc
aagatctggctgaagcgcctgctcaaggagctcgaggaagagggcgagaccggcggcgac
ggcgtcgaccggccggtgcatccgcgtggcgccctgcccccggtgctgctctgcgagatc
aagggcaaggatcgcgacggcgacgcctatggcgtgcctttggaatggaacgaggccgag
cagggtgtcgcgccgcgcatcctgatcgagcggccgcgtgagttccgggccaagcgccat
gccgcgccggcgccggccttcggcgaccaggtgctgctgaagctcacgcggctgaagggc
gtcgagggctatgcctattccggccgcgtgctgaaggtgatgggcaagggcaaggcgcag
gtgctcggcatcttccgcgccatgccggacggttcgggccgcctgatcccgatcgacaag
aaggcgcagggccgcgaggcgctgatcccgaagggccagaccggcgacgccgaggatggc
gacctcgtttccgtggcgctgcgcagcgagagccgcttcggtccgccggaggcacaggtc
aaagagcggctcggttcgctgaaatccgagcgcgcggtgagcctgatcgcgattcacgcc
catggcattcccaacgtcttccagcccgccacgatcgcggaatcggaggccgtgcggccg
gccgggacggcggggcgcgaggactggcgcgacctggccctgatcacgatcgaccccgcc
gacgccaaggaccatgacgacgccgtccatgccgcgcccgacgccgatcccgacaatccc
ggcggccatgtcgtcaccgtcgccatcgccgatgtcgcggcctatgtgcggccgggctcg
gcgctcgaccgcgaggcgctggagcgcggcaactcggtctatttccccgaccgcgtcgtg
ccgatgctgcccgagcggatctcgaacgacctctgctcgctgcgcgagggcgaggaccgg
ccggcgctggccgtgcggctcgtgctcaaggccgacggctcgaagaagagccattccttc
caccgcatcctgatgcgctcggcggccaagctctcctaccagcaggcccaggccgccatc
gacggacagggcgacgagaagggctcggccgtccgcgacacgatcctgatgccgctctgg
gcggcctacggcttggcggcccgcgcccgggacgcgcgccagccgctggatctcgatctg
cccgagcgcaagctgatcctgaaacccgacggctcggttgaccgcgtcgtcgtgccggag
cggctggcggcgcacaagctgatcgaggagttcatgatcctcgccaatgtcgcggcggcg
gagacgctggagaaggccgggagcctgctggtctatcgctgccatgacgagccctcgctc
gagaagatccgggcgctcggcgaagtcctggcctcgatcggcatcaagctgccgaaggag
ggcgtgctgcgcccggcgctgttcaaccgcatcctcggcatgatcaagggctcggagaac
gagatcttcatcaacgaggtcgtgctgcgcagccaggcccaggcggagtatgtcgccgag
aattacgggcatttcggcctcaacctgcgccgctacgcccatttcacctcgccgatccgg
cgctatgccgacctcgtcgtccaccgcgccctgatcgcggcccagcgcttcggcgaggac
ggcctgccgaagggcacgacgctggagacgctgcgcgaggtctcgacgcggatctcggcc
gccgagcggcgcgccatggcggccgagcgcgagacggtcgaccggctgatcgcacatttc
ctggccgaccagatcggcgcctccttcgacgggcgcatcggcggcgtcaacaaggcgggg
ctcttcgtcaagctcgacggcaccggcgccgacggcttcattcccgcctcgacgctcggc
gccgactactaccgctatgacgaggcggcgcatgcgctgatcggcgagcgcacgggcgaa
agcttccgtctcggcgaccgcgtccatgtgaagctggtcgaggcggcacccgtcgcgggt
gcgctgcgcttcgagctgctttcggccggccgggcggcaacggcgggcggcctgggcgga
cgcggtcccgcgccgcgccgcggcaagggcggcgccttcggcggtccgcccggcggccgc
agcggcccggggcgcttcgccaagggcaaggcgggcaaacccaaatccggaaagagacgg
tga
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