KEGG   Allobosea sp. RAC05: BSY19_299
Entry
BSY19_299         CDS       T04462                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bos  Allobosea sp. RAC05
Pathway
bos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSY19_299 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bos03021]
    BSY19_299 (rho)
   03019 Messenger RNA biogenesis [BR:bos03019]
    BSY19_299 (rho)
Transcription machinery [BR:bos03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BSY19_299 (rho)
Messenger RNA biogenesis [BR:bos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BSY19_299 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 NACHT S1CSD-TOTE-2 AAA ATPase_2 AAA_14 Fungal_virus_P2_C Spore_III_AA
Other DBs
NCBI-ProteinID: AOG05259
LinkDB
Position
complement(324067..325332)
AA seq 421 aa
MREIKLQDLKVKSPTELLAFSEGLEVENASTMRKQELMFAILKQLAARETEILGEGVVEV
LPDGFGFLRSPDSNYLPGPDDIYVSPTQIRKFGLRTGDTVEGPIRSPKDGERYFALLKVN
TINFEDPERIKHKINFDNLTPLYPDERLRLEVAEPAKKDFSARVIDIVAPIGKGQRALIV
APPRTGKTVLLQNIAQSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAT
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIVATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVSDKRIFPA
IDILKSGTRKEELITPKDVLAKTYVLRRILNPMGPQDAIEFLMDKLRQTKQNADFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgggaaatcaagctccaagacctcaaggtcaagtcgccgaccgaacttctcgccttc
tcggaggggctcgaggtcgagaacgccagcacgatgcgcaagcaggagctgatgttcgcg
atcctgaagcagctcgccgcccgggagaccgagatcctcggcgagggcgtcgtcgaggtg
ctgccggatggtttcggcttcctgcggtcgcccgattcgaactatctgccgggccccgac
gacatctacgtctcgccgacgcagatccggaaattcggcctgcgcaccggcgacacggtc
gaaggcccgatccgcagcccgaaggacggcgagcgctattttgccctgctcaaggtcaac
acgatcaatttcgaggatcccgagcggatcaagcacaagatcaatttcgacaacctgacg
ccgctctatcctgatgagcgcctgcggctcgaggttgcggagccggcgaagaaggatttc
tcggcccgcgtcatcgacatcgtggccccgatcggcaagggccagcgcgccctgatcgtc
gcgccgccgcggaccggcaagaccgtcctgctgcagaacatcgcgcagtcgatcacgacc
aaccacccggaatgctacctcatcgtcctgctgatcgacgagcgcccggaagaggtcacg
gacatgcagcgctcggtcaagggcgaggtcgtgtcctcgaccttcgacgagccggcgacc
cgccacgtccaggtggccgagatggtcatcgagaaggccaagcgcctggtcgaacatggc
cgcgacgtggtgatcctgctggactcgatcacccgcctcggccgcgcctacaacacggtg
gtcccctcctccggcaaggtgctgaccggcggtgtcgacgccaacgccttgcagcgcccc
aagcgcttcttcggcgcggcccgcaacatcgaggagggcggctcgctgaccatcgtcgcg
accgcgctgatcgacaccggcagccgcatggacgaggtgatcttcgaggagttcaagggc
accggtaactcggaaatcgtgctggaccgcaaggtctccgacaagcgcatcttcccggcg
atcgacatcctcaagtcgggcacccgcaaggaagagctcatcacgccgaaggatgtcctg
gccaagacctatgtcctgcgccgcatcctcaatccgatgggcccgcaggacgcgatcgag
ttcctgatggacaagctgcgccagaccaagcagaacgccgacttcttcgactcgatgaac
acctga

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