Allobosea sp. RAC05: BSY19_3651
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Entry
BSY19_3651 CDS
T04462
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bos
Allobosea sp. RAC05
Pathway
bos02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bos00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BSY19_3651 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bos03021
]
BSY19_3651 (rpoD)
Transcription machinery [BR:
bos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSY19_3651 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Phage_DsbA
Motif
Other DBs
NCBI-ProteinID:
AOG04753
LinkDB
All DBs
Position
complement(3837806..3839833)
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AA seq
675 aa
AA seq
DB search
MATKVSERDKADQATPEAPPTSDGPLLDLTDQAVRRMIKLAKKRGYVTYDELNEVLPSEE
FSSEQIEDVLGQLSEQGINVVDNEDPEASGEERAAARTGTNGPDEEEVEGGDLVDASRSA
LPVETKRNLEPTERTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGREAMIAGLCESPL
TFQAIIIWRDELNEAKVLLRDIIDLEATYAGPDGKNPTQIPGEGGEAEAAPAAEGEAPEG
DLPPDLDEDDMENNVSLSAMEAELKPRVLETFDSIADNYKKLRRLQDQDIANRLENTKLS
PSQDRKYKKLKDDIITAVKSLSLNNNRIEALVEQLYDINKRLISHETRLLRLAESYGVGR
EDFLKQHVGGELDPKWILRVSKLGSRGWKEFVAAELERIKSLRDEIHTLASETGLEIQEF
RKIVLMVQKGEREARQAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREP
TPEELAEKLAMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAILPIDAAIQS
NLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKL
KHPSRSRKLRSFLDN
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaagtgagcgaacgggacaaggccgatcaggccacgccggaagcccccccg
acctccgacggtccgttgctcgatctgacggatcaggccgtcaggcgcatgatcaagctc
gcgaagaagcgcggctatgtcacctatgacgaactgaacgaggtcctgccgtcggaggaa
ttctcctccgagcagatcgaggacgtgctcggccagctcagcgagcagggcatcaacgtc
gtcgacaacgaggatccggaagcctccggcgaggaacgcgccgcggcccgcaccggcacc
aacggccccgacgaggaagaggtcgagggcggtgatctggtcgatgcctcgcgctcggcc
ctgccggtcgagaccaagcgcaacctcgagccgaccgagcgcaccgacgatccggtgcgg
atgtatctgcgcgagatggggtcggtcgagctgctctcccgcgagggcgagatcgcgatc
gccaagcgcatcgaggctggtcgcgaggcgatgatcgccgggctctgcgagagcccgctg
accttccaggcgatcatcatctggcgcgacgagctgaacgaagccaaggttctgctgcgc
gacatcatcgacctcgaagcgacctatgccggccccgacggcaagaacccgacgcagatt
ccgggcgagggcggcgaggcggaggccgcgccggccgccgagggcgaggcgcccgaaggc
gacctgccgcccgatctcgacgaagacgacatggagaacaacgtgtcgctctcggccatg
gaggccgagctgaagccgcgcgtgctcgagacgttcgattcgatcgccgacaactacaag
aagctgcgccgcctgcaggatcaggacatcgccaaccggctggagaacaccaagctctcg
ccgtcgcaggaccgcaaatacaagaagctcaaggacgacatcatcaccgcggtgaagtcg
ctctcgctcaacaacaaccgcatcgaggcgctggtcgagcagctctacgacatcaacaag
cgcctgatctcgcatgagacgcgcctgctgcgcctggcggagagctatggcgtcggccgc
gaggacttcctcaagcagcatgtcggcggcgagctcgatccgaaatggatcctgcgcgtc
tccaagctgggctcgcgcggctggaaggagttcgtcgcggccgagctcgagcgcatcaag
agcctgcgcgacgagatccacacgctggcgagcgagacgggcctggagatccaggagttc
cgcaagatcgtgctgatggtccagaagggcgagcgcgaggcgcgtcaggcgaagaaggag
atgatcgaggcaaacttgcgcctcgtgatctcgatcgccaagaaatacaccaatcgcggc
ctgcagttcctcgacctgatccaggaaggcaacatcggcctgatgaaggcggtcgacaag
ttcgagtaccgccgcggctacaagttctcgacctatgcgacctggtggatccgccaggcg
atcacccgctcgatcgccgaccaggcccgcacgatccgcatccccgtccacatgatcgag
acgatcaacaagatcgtgcggacctcgcgccagatgctgcacgagatcggccgcgagccg
accccggaggagctggccgagaaactcgccatgccgctggagaaggtgcgcaaggtcctc
aagatcgccaaggagccgatctcgctggagaccccgatcggcgacgaggaagacagccat
ctcggcgacttcatcgaggacaagaacgcgatcctgccgatcgatgcggcgatccagagc
aacctgcgcgagaccacgacgcgcgtgctcgcctcgctcactccgcgcgaggagcgcgtg
ctgcgcatgcgcttcggcatcggcatgaacaccgatcacacgctcgaagaggtcggccag
cagttcagcgtcacccgcgagcgcattcgccagatcgaggcgaaggcgctccggaagctg
aagcatccgagccgcagccggaagctgcggagcttcctggacaattga
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